BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0314300 Os09g0314300|AK101689
         (380 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18160.3  | chr3:6220918-6222923 FORWARD LENGTH=377            263   1e-70
AT1G48635.2  | chr1:17983951-17985966 FORWARD LENGTH=401          255   3e-68

>AT3G18160.3 | chr3:6220918-6222923 FORWARD LENGTH=377
          Length = 376

 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/376 (39%), Positives = 213/376 (56%), Gaps = 35/376 (9%)

Query: 10  GRHRRKILVSLGVXXXXXXXXRYLDSHRRQXXXXXXXXXXXXXXXXIIKNQLQTHFENVQ 69
           G+HRRKILV+           +  ++H R+                IIK Q++ HF+N+Q
Sbjct: 27  GKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQ 86

Query: 70  KISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKIKILS 129
            I+DTTTLP A+H+L SR++EE+D+S + +KL  GKG      L P EK   W ++KILS
Sbjct: 87  MIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG-----ILIPSEKLQLWNELKILS 141

Query: 130 FTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKDFLAT 189
           FTR V S+W++T+LSLY+RVQV ILGRHLY+D AR    + L +  D   +   + FL +
Sbjct: 142 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKFLTS 201

Query: 190 ADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDNSWIN 249
           AD+LAT G+ +LI+ MQ+A  E+LK KQLKD +    + ET+++IL  FM     + W++
Sbjct: 202 ADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVD 261

Query: 250 YLVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDRSLKKI 309
           Y           LM    +  D SS    V K   L++ETR VL+S+DF N+ + SLK  
Sbjct: 262 Y-----------LMMSQDATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCC 310

Query: 310 ASVVVEDLAVXXXXXXXXXXXXXXXXXXXXXXXSLPLLE--------EPDKNKHIQIIRS 361
           A  +VE++                          LP +E        EP+KN+ +Q+IR 
Sbjct: 311 AVALVEEMETQTGLATGMQLAKL-----------LPQIEKTMPEISAEPEKNRFLQLIRD 359

Query: 362 MPEVELFYTFLYANMP 377
           +PEV+LF+T LYANMP
Sbjct: 360 LPEVKLFFTLLYANMP 375



>AT1G48635.2 | chr1:17983951-17985966 FORWARD LENGTH=401
          Length = 400

 Score =  255 bits (652), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/410 (36%), Positives = 216/410 (52%), Gaps = 51/410 (12%)

Query: 5   ARGFWGRHRRKILVSLGVXXXXXXXXRYLDSHRRQXXXXXXXXXXXXXXXXIIKNQLQTH 64
            RGFW +HRRK+LV+ G         +  +SH R+                IIK Q++ H
Sbjct: 4   VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63

Query: 65  FENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEK 124
           FE++Q I D+TTLP AM +L  RI EE+D+SH+ ++L  GKG      L+P EK   W++
Sbjct: 64  FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG-----MLSPPEKLQLWDE 118

Query: 125 IKILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQL------------- 171
           +KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR    + L             
Sbjct: 119 LKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLCTLLISSPTSYF 178

Query: 172 -----------------------QEGSDTFSKSGHKDFLATADYLATYGINALITKMQHA 208
                                   E  D   +   + FL++AD+L T  + +LI+ MQ +
Sbjct: 179 SGKLTGCSVKNFSRLPFKATAACPEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGS 238

Query: 209 ATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDNSWINYL-VPENANVYAQLMAVSS 267
           A E+LK KQLKD +    + ET++QI+  FM     + W++YL +P++     +L   +S
Sbjct: 239 AEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQD----TKLSRTTS 294

Query: 268 SGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDRSLKKIASVVVEDLAVXXXXXXXX 327
              D++     V K  QLM ETR VL S +F NI++ SLK    V+VE++          
Sbjct: 295 DSSDEA-----VSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLA 349

Query: 328 XXXXXXXXXXXXXXXSLPLLEEPDKNKHIQIIRSMPEVELFYTFLYANMP 377
                             +  EP KN+ +QIIR +PEV+LF+T LYANMP
Sbjct: 350 TGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 399



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,858,448
Number of extensions: 245498
Number of successful extensions: 661
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 653
Number of HSP's successfully gapped: 3
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)