FiT-DB / Search/ Help/ Sample detail
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Os09g0298100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.45 | 0.593 | 5.17 | 2.97 | 0.86 | -1.81 | 0.666 | 0.245 | 0.351 | 9.94 | 2.159 | 1495 | -- | -- |
| 159.43 | 0.588 | 5.17 | 3 | 0.863 | -1.82 | 0.64 | -- | 0.353 | 9.96 | 2.307 | 1493 | -- | -- |
| 161.01 | 0.591 | 5.17 | 3.01 | 0.869 | -1.78 | -- | 0.143 | 0.35 | 10 | 2.333 | 1489 | -- | -- |
| 160.99 | 0.591 | 5.17 | 3.03 | 0.874 | -1.79 | -- | -- | 0.359 | 10 | 2.29 | 1489 | -- | -- |
| 190.81 | 0.643 | 5.21 | 2.99 | -- | -2.33 | -- | 0.549 | 0.337 | -- | 2.459 | 1564 | -- | -- |
| 194.06 | 0.653 | 5.11 | 3.35 | 1.08 | -- | 0.448 | -- | 0.598 | 10.4 | -- | -- | -- | -- |
| 194.87 | 0.654 | 5.11 | 3.37 | 1.08 | -- | -- | -- | 0.599 | 10.4 | -- | -- | -- | -- |
| 189.91 | 0.642 | 5.2 | 2.97 | -- | -2.42 | -- | -- | 0.297 | -- | 2.34 | 1562 | -- | -- |
| 374.1 | 0.901 | 5.24 | -- | 1.2 | -2.37 | -- | -- | 0.0605 | 9.18 | 0.0001093 | 1435 | -- | -- |
| 265.79 | 0.762 | 5.14 | 3.35 | -- | -- | -- | -- | 0.596 | -- | -- | -- | -- | -- |
| 493.34 | 1.04 | 5.19 | -- | 1.06 | -- | -- | -- | 0.224 | 10.1 | -- | -- | -- | -- |
| 389.79 | 0.92 | 5.29 | -- | -- | -3.53 | -- | -- | -0.0317 | -- | 0.07978 | 1546 | -- | -- |
| 561.42 | 1.11 | 5.22 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 2 | 147.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 14 |
| 6 | 147.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 13 | 148.33 | wind | 9.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 14 | 148.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 15 | 148.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 31 | 148.87 | wind | 9.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 43 | 149.14 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 48 | 149.27 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 108 | 150.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 113 | 150.89 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 120 | 151.09 | wind | 9.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 399 | 154.06 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 20 |
| 580 | 155.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 586 | 155.76 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 649 | 156.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 655 | 156.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 656 | 156.26 | wind | 9.0 | 14400 | > th | dose independent | no | NA | NA |
| 661 | 156.27 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 19 |
| 685 | 156.36 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 694 | 156.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 736 | 156.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 748 | 156.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 749 | 156.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 760 | 156.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 777 | 157.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 784 | 157.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 803 | 157.27 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 804 | 157.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 805 | 157.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 807 | 157.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 821 | 157.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 826 | 157.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 827 | 157.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 842 | 157.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 858 | 157.44 | wind | 9.0 | 14400 | < th | dose independent | no | NA | NA |
| 887 | 157.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 913 | 157.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 932 | 157.99 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 944 | 158.09 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 993 | 158.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
