Os09g0297100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CROC-1-like protein (Fragment).
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Os09g0297100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CROC-1-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.69 | 0.192 | 13.5 | -0.323 | 0.532 | -0.0174 | 0.135 | 1.42 | 0.0529 | 5.23 | 0.009977 | 8661 | -- | -- |
| 18.83 | 0.202 | 13.5 | -0.0576 | 0.525 | 0.142 | 0.21 | -- | 0.169 | 5.12 | 20.19 | 25383 | -- | -- |
| 16.73 | 0.191 | 13.5 | -0.324 | 0.533 | -0.0177 | -- | 1.43 | 0.0526 | 5.23 | 0.004592 | 8675 | -- | -- |
| 18.16 | 0.2 | 13.5 | -0.0204 | 0.517 | 0.32 | -- | -- | 0.133 | 6.53 | 60.9 | 25375 | -- | -- |
| 25.49 | 0.235 | 13.5 | -0.283 | -- | 0.785 | -- | 3.12 | 0.0546 | -- | 2.969e-06 | 6409 | -- | -- |
| 19.51 | 0.207 | 13.5 | -0.0251 | 0.53 | -- | 0.134 | -- | 0.135 | 5.24 | -- | -- | -- | -- |
| 19.55 | 0.207 | 13.5 | -0.025 | 0.531 | -- | -- | -- | 0.134 | 5.25 | -- | -- | -- | -- |
| 23.67 | 0.227 | 13.4 | 0.0175 | -- | 0.619 | -- | -- | 0.216 | -- | 6.483 | 2086 | -- | -- |
| 18.17 | 0.2 | 13.5 | -- | 0.517 | 0.32 | -- | -- | 0.136 | 6.54 | 60.9 | 25375 | -- | -- |
| 34.26 | 0.274 | 13.5 | -0.00651 | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
| 19.57 | 0.207 | 13.5 | -- | 0.53 | -- | -- | -- | 0.137 | 5.25 | -- | -- | -- | -- |
| 20.22 | 0.209 | 13.5 | -- | -- | 0.642 | -- | -- | 0.216 | -- | 29.17 | 578 | -- | -- |
| 34.26 | 0.273 | 13.5 | -- | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 2 | 16.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 11 | 16.29 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 15 | 16.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 23 | 16.33 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 33 | 16.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 63 | 16.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 100 | 16.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 102 | 16.47 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 147 | 16.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 150 | 16.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 151 | 16.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 185 | 16.61 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 196 | 16.61 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 238 | 16.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 241 | 16.68 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 9 |
| 242 | 16.68 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 11 |
| 249 | 16.69 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 260 | 16.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 261 | 16.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 276 | 16.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 304 | 16.74 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 305 | 16.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 308 | 16.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 309 | 16.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 317 | 16.75 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 318 | 16.75 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 330 | 16.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 366 | 16.78 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 424 | 16.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 448 | 16.82 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 449 | 16.82 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 476 | 16.83 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 490 | 16.84 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 491 | 16.84 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 497 | 16.84 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 502 | 16.84 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 507 | 16.85 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 532 | 16.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 543 | 16.87 | humidity | 90.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 557 | 16.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 593 | 16.89 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 609 | 16.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 624 | 16.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 625 | 16.90 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 657 | 16.90 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 666 | 16.91 | radiation | 30.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 683 | 16.92 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 691 | 16.92 | radiation | 20.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 700 | 16.93 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 706 | 16.93 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 733 | 16.94 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 738 | 16.94 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 745 | 16.94 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 777 | 16.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 778 | 16.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 795 | 16.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 815 | 16.96 | radiation | 30.0 | 270 | < th | dose independent | sin | 7 | NA |
| 818 | 16.96 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 820 | 16.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 836 | 16.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 873 | 16.97 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 888 | 16.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 891 | 16.97 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 932 | 16.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 959 | 16.98 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |