Os09g0296700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, group 1 domain containing protein.
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Os09g0296700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, group 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.53 | 0.327 | 7.09 | 0.531 | 0.467 | -0.654 | -0.0874 | 1.55 | -0.144 | 5.98 | 24.4 | 2124 | -- | -- |
| 51.18 | 0.333 | 7.14 | 0.00319 | 0.497 | -0.491 | -0.088 | -- | -0.301 | 5.96 | 23.7 | 2014 | -- | -- |
| 48.39 | 0.324 | 7.09 | 0.532 | 0.467 | -0.624 | -- | 1.49 | -0.154 | 6.21 | 24.1 | 2014 | -- | -- |
| 50.9 | 0.332 | 7.14 | 0.0139 | 0.502 | -0.509 | -- | -- | -0.28 | 6.49 | 23.6 | 1859 | -- | -- |
| 57.6 | 0.353 | 7.08 | 0.646 | -- | -0.798 | -- | 2.02 | -0.0897 | -- | 25.2 | 1989 | -- | -- |
| 61.97 | 0.369 | 7.19 | -0.203 | 0.526 | -- | -0.136 | -- | -0.505 | 6.65 | -- | -- | -- | -- |
| 62.01 | 0.369 | 7.19 | -0.205 | 0.525 | -- | -- | -- | -0.505 | 6.69 | -- | -- | -- | -- |
| 63.08 | 0.37 | 7.16 | 0.0507 | -- | -0.589 | -- | -- | -0.303 | -- | 24.39 | 2041 | -- | -- |
| 50.91 | 0.332 | 7.14 | -- | 0.502 | -0.507 | -- | -- | -0.281 | 6.5 | 23.68 | 1859 | -- | -- |
| 76.42 | 0.408 | 7.2 | -0.192 | -- | -- | -- | -- | -0.495 | -- | -- | -- | -- | -- |
| 63.12 | 0.372 | 7.19 | -- | 0.523 | -- | -- | -- | -0.482 | 6.71 | -- | -- | -- | -- |
| 63.05 | 0.37 | 7.16 | -- | -- | -0.598 | -- | -- | -0.282 | -- | 24.4 | 2042 | -- | -- |
| 77.39 | 0.411 | 7.2 | -- | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 3 | 48.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 6 | 48.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 9 | 48.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 10 | 48.65 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 23 | 48.84 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 26 | 48.86 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 28 | 48.93 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 29 | 48.93 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 30 | 48.93 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 33 | 48.95 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 41 | 49.08 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 48 | 49.13 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 52 | 49.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 55 | 49.23 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 58 | 49.25 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 59 | 49.25 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 64 | 49.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 65 | 49.28 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 67 | 49.29 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 69 | 49.30 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 70 | 49.30 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 71 | 49.30 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 74 | 49.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 82 | 49.35 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 85 | 49.36 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 91 | 49.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 96 | 49.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 105 | 49.41 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 15 |
| 109 | 49.42 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 127 | 49.43 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 128 | 49.43 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 132 | 49.44 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 175 | 49.48 | temperature | 25 | 4320 | > th | dose dependent | sin | 14 | NA |
| 176 | 49.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 180 | 49.48 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 192 | 49.50 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 197 | 49.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 228 | 49.55 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 292 | 49.62 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 294 | 49.62 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 307 | 49.63 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 327 | 49.66 | radiation | 20 | 43200 | < th | dose independent | sin | 9 | NA |
| 384 | 49.71 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 431 | 49.75 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 488 | 49.78 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 21 |
| 508 | 49.80 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 509 | 49.80 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 559 | 49.83 | humidity | 60 | 43200 | > th | dose independent | sin | 8 | NA |
| 613 | 49.86 | temperature | 25 | 4320 | > th | dose independent | sin | 21 | NA |
| 614 | 49.86 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 643 | 49.88 | temperature | 25 | 4320 | < th | dose independent | sin | 21 | NA |
| 644 | 49.88 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 697 | 49.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 22 |
| 723 | 49.92 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 776 | 49.93 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 828 | 49.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 873 | 49.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |