BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0296700 Os09g0296700|AK070245
         (487 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0296700  Glycosyl transferase, group 1 domain containin...   769   0.0  
AK121536                                                          769   0.0  

>Os09g0296700 Glycosyl transferase, group 1 domain containing protein
          Length = 487

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/427 (88%), Positives = 380/427 (88%)

Query: 61  KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEHXXXXXXXXXXXXXXH 120
           KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEH              H
Sbjct: 61  KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEHAADAAAANFTLAIAH 120

Query: 121 HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY 180
           HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY
Sbjct: 121 HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY 180

Query: 181 DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTFXXXXXXXXXXXXXXXXXX 240
           DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTF                  
Sbjct: 181 DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTFVKSGVDPSKVVKVVQAVD 240

Query: 241 XXFFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL 300
             FFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL
Sbjct: 241 VGFFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL 300

Query: 301 QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP 360
           QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP
Sbjct: 301 QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP 360

Query: 361 RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV 420
           RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV
Sbjct: 361 RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV 420

Query: 421 TEGPFKGHLCAEPSVDRLRTLMRHVFSDXXXXXXXXXXXXXDMVERFSPAIVATIVADKI 480
           TEGPFKGHLCAEPSVDRLRTLMRHVFSD             DMVERFSPAIVATIVADKI
Sbjct: 421 TEGPFKGHLCAEPSVDRLRTLMRHVFSDREEARRKGKKAREDMVERFSPAIVATIVADKI 480

Query: 481 QQALAST 487
           QQALAST
Sbjct: 481 QQALAST 487



>AK121536 
          Length = 487

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/427 (88%), Positives = 380/427 (88%)

Query: 61  KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEHXXXXXXXXXXXXXXH 120
           KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEH              H
Sbjct: 61  KERGPPSGTSPDARRPPCVLWMAPFASGGGYCSEAWSYVASLEEHAADAAAANFTLAIAH 120

Query: 121 HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY 180
           HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY
Sbjct: 121 HGDLESPEFWLGLPEESKNMAYRLATARCELSRAVVVCHSEPGAWYPPMYESLPCPPTGY 180

Query: 181 DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTFXXXXXXXXXXXXXXXXXX 240
           DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTF                  
Sbjct: 181 DEPAFVIGRTMFETDRVSPEHVRRCNQMDAVWVPTEFHVSTFVKSGVDPSKVVKVVQAVD 240

Query: 241 XXFFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL 300
             FFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL
Sbjct: 241 VGFFDPAKHAAIPLPIGVPVMVPDDSRLDPVNSKGKGFVFLSVFKWEQRKGWDVLLRAFL 300

Query: 301 QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP 360
           QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP
Sbjct: 301 QEFSGADDVVLYLLINAYHSDTDFDRKIRSFVKDSSIEKPMDGWAEVRLIDEHIPQSALP 360

Query: 361 RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV 420
           RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV
Sbjct: 361 RLYKAADAFVLPSRGEGWGRPVVEAMSMELPVIVTNWSGPTEYLNEENGYPLDIDRLTEV 420

Query: 421 TEGPFKGHLCAEPSVDRLRTLMRHVFSDXXXXXXXXXXXXXDMVERFSPAIVATIVADKI 480
           TEGPFKGHLCAEPSVDRLRTLMRHVFSD             DMVERFSPAIVATIVADKI
Sbjct: 421 TEGPFKGHLCAEPSVDRLRTLMRHVFSDREEARRKGKKAREDMVERFSPAIVATIVADKI 480

Query: 481 QQALAST 487
           QQALAST
Sbjct: 481 QQALAST 487



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.136    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,863,874
Number of extensions: 670372
Number of successful extensions: 1327
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1325
Number of HSP's successfully gapped: 2
Length of query: 487
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 382
Effective length of database: 11,553,331
Effective search space: 4413372442
Effective search space used: 4413372442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)