Os09g0280300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Oxidoreductase, N-terminal domain containing protein.
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Os09g0280300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Oxidoreductase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.09 | 0.297 | 9.44 | -1.72 | 0.49 | 1.28 | -0.079 | -2.36 | -0.668 | 0.961 | 20.46 | 758 | -- | -- |
| 44.23 | 0.31 | 9.37 | -1.21 | 0.464 | 1.17 | -0.322 | -- | -0.52 | 0.118 | 18.07 | 846 | -- | -- |
| 40.09 | 0.295 | 9.44 | -1.75 | 0.494 | 1.28 | -- | -2.5 | -0.667 | 0.994 | 20.88 | 757 | -- | -- |
| 44.17 | 0.31 | 9.38 | -1.26 | 0.562 | 1.23 | -- | -- | -0.495 | 22.7 | 15.1 | 1138 | -- | -- |
| 51.46 | 0.334 | 9.43 | -1.79 | -- | 1.46 | -- | -2.54 | -0.687 | -- | 22.07 | 890 | -- | -- |
| 70 | 0.392 | 9.34 | -0.872 | 0.728 | -- | -0.224 | -- | -0.309 | 23.2 | -- | -- | -- | -- |
| 70.21 | 0.392 | 9.33 | -0.863 | 0.729 | -- | -- | -- | -0.308 | 23.1 | -- | -- | -- | -- |
| 56.48 | 0.35 | 9.35 | -1.18 | -- | 1.27 | -- | -- | -0.466 | -- | 23.94 | 917 | -- | -- |
| 75.08 | 0.404 | 9.32 | -- | 0.617 | 0.591 | -- | -- | -0.213 | 22.9 | 26.6 | 1136 | -- | -- |
| 103.37 | 0.475 | 9.32 | -0.846 | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
| 89.83 | 0.443 | 9.31 | -- | 0.721 | -- | -- | -- | -0.212 | 23.1 | -- | -- | -- | -- |
| 90.65 | 0.443 | 9.31 | -- | -- | 1.02 | -- | -- | -0.276 | -- | 24.7 | 899 | -- | -- |
| 122.23 | 0.516 | 9.3 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 18 |
| 43 | 39.30 | temperature | 20 | 720 | > th | dose dependent | sin | 23 | NA |
| 104 | 40.11 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 108 | 40.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 113 | 40.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 114 | 40.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 117 | 40.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 131 | 40.21 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 164 | 40.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 184 | 40.33 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 207 | 40.37 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 241 | 40.40 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 274 | 40.48 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 482 | 40.86 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 603 | 41.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 641 | 41.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 735 | 41.42 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 739 | 41.43 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 970 | 41.82 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 971 | 41.82 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 993 | 41.86 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 998 | 41.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 15 |