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Os09g0272500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.88 (0.0157) R2 : 0.023
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.108 (0.033) R2dN8 : 0.0297 R2N8 : 0.023
σ : 0.295
deviance : 40.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.77 0.261 8.88 -0.374 0.194 0.311 -0.926 -0.359 -0.132 10.1 15.79 28 -- --
30.93 0.259 8.88 -0.383 0.162 0.277 -0.602 -- -0.137 9.61 15.78 25 -- --
31.64 0.262 8.88 -0.4 0.194 0.311 -- 0.309 -0.135 10.8 15.27 25 -- --
32.15 0.264 8.88 -0.403 0.234 0.347 -- -- -0.133 10.9 16.27 25 -- --
32.36 0.265 8.89 -0.391 -- 0.205 -- 0.315 -0.141 -- 25.23 93 -- --
33.5 0.271 8.89 -0.39 0.152 -- 0.445 -- -0.153 0.161 -- -- -- --
34.11 0.274 8.89 -0.41 0.166 -- -- -- -0.157 1.8 -- -- -- --
32.69 0.266 8.89 -0.398 -- 0.232 -- -- -0.142 -- 31.84 148 -- --
36.39 0.281 8.87 -- 0.242 0.356 -- -- -0.0889 11.1 17.6 25 -- --
35.78 0.28 8.89 -0.403 -- -- -- -- -0.153 -- -- -- -- --
38.53 0.29 8.88 -- 0.159 -- -- -- -0.111 1.72 -- -- -- --
36.85 0.283 8.88 -- -- 0.246 -- -- -0.0973 -- 34.57 158 -- --
40.06 0.295 8.88 -- -- -- -- -- -0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.60 radiation 1.0 1440 < th dose independent rect. 11 1
2 27.60 radiation 1.0 1440 < th dose dependent rect. 11 1
3 28.70 radiation 1.0 1440 < th dose independent rect. 13 1
4 28.70 radiation 1.0 1440 < th dose dependent rect. 13 1
5 28.77 radiation 1.0 1440 < th dose independent rect. 11 3
6 28.77 radiation 1.0 1440 < th dose dependent rect. 11 3
11 28.82 radiation 1.0 1440 > th dose independent rect. 11 3
26 28.98 humidity 60.0 14400 > th dose independent rect. 24 8
47 29.21 wind 7.0 4320 > th dose independent rect. 17 2
48 29.23 atmosphere 1005.0 10 < th dose dependent rect. 1 9
50 29.25 wind 1.0 720 < th dose independent rect. 23 1
66 29.34 wind 7.0 4320 < th dose independent rect. 17 2
78 29.61 humidity 70.0 14400 < th dose dependent rect. 21 1
91 29.66 wind 7.0 4320 > th dose independent rect. 15 6
93 29.70 wind 7.0 4320 < th dose independent rect. 16 5
105 29.78 wind 7.0 4320 > th dose dependent rect. 17 2
108 29.79 radiation 20.0 90 < th dose dependent rect. 24 23
109 29.80 wind 1.0 1440 > th dose independent rect. 23 1
117 29.85 wind 1.0 720 > th dose independent rect. 10 15
124 29.90 atmosphere 1005.0 10 < th dose dependent rect. 1 7
126 29.92 wind 7.0 4320 > th dose dependent rect. 17 4
133 29.96 humidity 60.0 14400 < th dose independent rect. 6 1
135 29.96 humidity 60.0 14400 < th dose independent rect. 20 1
137 29.96 radiation 20.0 14400 > th dose independent rect. 17 1
189 29.96 humidity 60.0 14400 < th dose dependent rect. 6 1
193 29.96 radiation 20.0 14400 > th dose dependent rect. 17 1
245 29.97 radiation 1.0 43200 < th dose dependent rect. 24 2
253 30.00 atmosphere 1005.0 720 < th dose independent rect. 21 4
254 30.00 temperature 20.0 720 > th dose independent rect. 20 5
261 30.01 atmosphere 1005.0 720 < th dose independent rect. 19 6
263 30.03 radiation 20.0 1440 < th dose dependent rect. 11 1
266 30.04 radiation 20.0 1440 < th dose independent rect. 11 2
268 30.04 temperature 20.0 270 > th dose independent rect. 20 11
281 30.09 temperature 20.0 1440 > th dose independent rect. 21 1
283 30.10 wind 5.0 4320 < th dose independent rect. 24 1
291 30.12 temperature 20.0 1440 < th dose independent rect. 20 5
302 30.15 atmosphere 1005.0 720 < th dose independent rect. 23 1
321 30.18 temperature 20.0 270 > th dose independent sin 11 NA
326 30.18 radiation 10.0 30 < th dose dependent rect. 5 23
327 30.19 temperature 20.0 1440 < th dose independent rect. 21 1
332 30.20 humidity 60.0 14400 > th dose independent rect. 7 1
353 30.24 wind 5.0 4320 > th dose independent rect. 24 1
363 30.25 temperature 20.0 270 > th dose independent rect. 17 14
403 30.31 temperature 20.0 1440 > th dose independent rect. 23 1
404 30.31 wind 1.0 14400 > th dose independent rect. 24 2
423 30.33 temperature 10.0 30 > th dose dependent rect. 23 18
426 30.34 radiation 10.0 90 < th dose independent rect. 24 23
441 30.36 humidity 90.0 720 > th dose dependent rect. 20 3
447 30.37 temperature 20.0 14400 < th dose independent rect. 21 1
451 30.38 wind 1.0 720 < th dose independent rect. 17 8
455 30.39 temperature 20.0 14400 > th dose independent rect. 21 1
474 30.41 precipitation 0.1 270 > th dose independent rect. 2 2
480 30.42 wind 1.0 720 < th dose independent rect. 20 5
491 30.42 precipitation 0.1 270 > th dose dependent rect. 2 2
496 30.43 temperature 20.0 1440 < th dose independent rect. 23 1
512 30.44 radiation 1.0 43200 < th dose dependent rect. 22 4
524 30.46 wind 1.0 720 < th dose dependent rect. 23 1
533 30.47 wind 1.0 43200 < th dose dependent rect. 2 1
589 30.53 wind 1.0 14400 < th dose independent rect. 24 2
603 30.53 radiation 20.0 10 < th dose dependent rect. 17 21
653 30.58 wind 1.0 43200 < th dose independent rect. 2 1
654 30.58 wind 7.0 43200 < th dose independent rect. 17 1
678 30.59 precipitation 0.1 270 > th dose dependent rect. 23 5
702 30.61 precipitation 0.1 270 > th dose independent rect. 23 5
712 30.61 radiation 40.0 4320 < th dose independent rect. 18 14
726 30.62 humidity 50.0 30 > th dose dependent rect. 24 23
728 30.63 wind 7.0 43200 > th dose independent rect. 17 1
741 30.64 radiation 40.0 4320 < th dose independent rect. 2 6
751 30.64 radiation 40.0 43200 < th dose independent rect. 15 19
770 30.65 temperature 25.0 10 > th dose independent rect. 23 18
778 30.65 radiation 10.0 1440 < th dose dependent rect. 8 14
779 30.65 radiation 10.0 1440 < th dose dependent rect. 8 16
780 30.66 wind 1.0 270 > th dose independent sin 16 NA
786 30.66 radiation 10.0 43200 < th dose independent rect. 17 15
789 30.66 wind 3.0 4320 > th dose dependent rect. 24 1
795 30.66 radiation 10.0 1440 < th dose dependent rect. 8 19
825 30.68 wind 7.0 4320 > th dose independent sin 16 NA
831 30.68 temperature 20.0 30 > th dose independent rect. 17 11
840 30.68 radiation 10.0 4320 < th dose dependent rect. 24 5
842 30.68 radiation 20.0 30 < th dose dependent rect. 17 17
846 30.69 radiation 40.0 4320 < th dose independent rect. 6 2
863 30.70 wind 7.0 4320 < th dose independent sin 16 NA
879 30.70 radiation 30.0 43200 > th dose dependent rect. 16 17
881 30.70 radiation 20.0 90 < th dose dependent rect. 12 23
883 30.71 radiation 40.0 43200 < th dose independent sin 11 NA
884 30.71 radiation 1.0 1440 > th dose independent rect. 9 1
885 30.71 radiation 40.0 43200 < th dose independent rect. 7 3
914 30.71 wind 9.0 4320 < th dose dependent rect. 17 1
916 30.71 radiation 30.0 43200 > th dose dependent rect. 7 2
946 30.72 temperature 20.0 270 > th dose independent rect. 21 19
955 30.73 radiation 10.0 43200 < th dose independent rect. 12 1
956 30.73 radiation 20.0 43200 < th dose independent rect. 16 1
968 30.73 atmosphere 1005.0 270 < th dose independent rect. 22 9
969 30.73 radiation 20.0 43200 < th dose independent rect. 16 9
977 30.73 wind 1.0 720 < th dose independent rect. 13 12
993 30.73 radiation 1.0 43200 < th dose dependent rect. 20 6