Os09g0249400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0249400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.85 | 0.531 | 6.22 | -1.03 | 0.695 | 2.62 | -0.622 | 0.111 | -0.524 | 20.7 | 17 | 6 | -- | -- |
| 127.83 | 0.527 | 6.22 | -1.04 | 0.697 | 2.63 | -0.659 | -- | -0.524 | 20.7 | 16.91 | 4 | -- | -- |
| 128.93 | 0.529 | 6.21 | -0.965 | 0.691 | 2.65 | -- | 0.441 | -0.514 | 20.9 | 16.8 | 4 | -- | -- |
| 129.13 | 0.529 | 6.22 | -1.03 | 0.697 | 2.64 | -- | -- | -0.534 | 20.9 | 17 | 4 | -- | -- |
| 145.8 | 0.562 | 6.19 | -1 | -- | 2.57 | -- | 0.338 | -0.501 | -- | 16.7 | 156 | -- | -- |
| 213.75 | 0.685 | 6.12 | -0.472 | 1.02 | -- | -0.102 | -- | -0.116 | 17.1 | -- | -- | -- | -- |
| 213.78 | 0.685 | 6.12 | -0.472 | 1.02 | -- | -- | -- | -0.117 | 17.1 | -- | -- | -- | -- |
| 145.8 | 0.562 | 6.2 | -1.06 | -- | 2.58 | -- | -- | -0.52 | -- | 16.87 | 156 | -- | -- |
| 153.43 | 0.58 | 6.18 | -- | 0.685 | 2.07 | -- | -- | -0.363 | 20.1 | 19.5 | 3 | -- | -- |
| 268.73 | 0.766 | 6.11 | -0.509 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 219.66 | 0.693 | 6.11 | -- | 1.03 | -- | -- | -- | -0.0642 | 17.1 | -- | -- | -- | -- |
| 171.12 | 0.609 | 6.16 | -- | -- | 2.06 | -- | -- | -0.366 | -- | 19.7 | 134 | -- | -- |
| 275.56 | 0.775 | 6.1 | -- | -- | -- | -- | -- | -0.0863 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.90 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 122.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 122.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 15 | 128.56 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 17 | 128.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 18 | 128.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 22 | 129.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 24 | 129.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 27 | 129.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 129.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 36 | 130.33 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 38 | 130.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 43 | 130.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 60 | 131.86 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 61 | 131.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 68 | 132.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 77 | 132.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 116 | 134.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 143 | 136.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 148 | 136.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 157 | 136.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 186 | 137.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 234 | 139.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 239 | 139.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 263 | 140.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 412 | 144.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 520 | 147.06 | temperature | 15 | 90 | > th | dose dependent | sin | 6 | NA |
| 534 | 147.27 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 570 | 147.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 641 | 149.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 675 | 149.62 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 22 |
| 704 | 150.04 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 909 | 151.80 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 930 | 151.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 964 | 152.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |