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Os09g0133800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0111) R2 : 0.521
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.616 (0.0279) R2dC : 0.513 R2C : 0.506
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0768 (0.0234) R2dN8 : 0.0146 R2N8 : 0.0073
σ : 0.21
deviance : 20.06
__
_____
C
peak time of C : 15.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.35 0.19 10.3 0.514 0.614 0.172 0.243 -0.605 0.222 15.7 24.6 753 -- --
16.94 0.193 10.3 0.325 0.661 0.111 0.212 -- 0.159 15.2 24.1 467 -- --
16.25 0.188 10.2 0.546 0.631 0.168 -- -0.58 0.231 15.6 24.2 535 -- --
17.01 0.192 10.3 0.325 0.632 0.132 -- -- 0.161 15.4 24.01 437 -- --
34.97 0.275 10.3 0.484 -- 0.37 -- -0.464 0.231 -- 25 1100 -- --
17.82 0.198 10.3 0.278 0.621 -- 0.205 -- 0.107 15.3 -- -- -- --
17.96 0.198 10.3 0.282 0.622 -- -- -- 0.108 15.3 -- -- -- --
35.76 0.279 10.3 0.364 -- 0.341 -- -- 0.214 -- 24.95 1106 -- --
19.73 0.207 10.3 -- 0.631 0.0771 -- -- 0.101 15.5 24 449 -- --
39.8 0.295 10.3 0.256 -- -- -- -- 0.0918 -- -- -- -- --
20.06 0.21 10.3 -- 0.616 -- -- -- 0.0768 15.3 -- -- -- --
35.4 0.278 10.3 -- -- -0.247 -- -- -0.0331 -- 25.6 1112 -- --
41.52 0.301 10.3 -- -- -- -- -- 0.0634 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.12 wind 9.0 4320 < th dose independent rect. 23 4
2 15.20 wind 9.0 270 < th dose independent rect. 5 10
3 15.20 radiation 30.0 270 < th dose independent rect. 15 14
5 15.23 humidity 60.0 90 > th dose dependent rect. 21 5
7 15.26 temperature 10.0 270 > th dose independent rect. 5 10
8 15.26 atmosphere 1015.0 270 < th dose independent rect. 5 10
9 15.26 precipitation 0.1 270 < th dose independent rect. 5 10
10 15.26 temperature 10.0 270 > th dose independent rect. 15 14
11 15.26 precipitation 0.1 270 < th dose dependent rect. 5 10
15 15.32 atmosphere 995.0 270 > th dose independent rect. 5 10
18 15.35 humidity 60.0 270 > th dose dependent rect. 21 3
19 15.36 precipitation 0.1 270 < th dose independent rect. 15 14
22 15.36 precipitation 0.1 270 < th dose dependent rect. 15 14
26 15.40 wind 9.0 90 < th dose dependent rect. 21 5
34 15.44 wind 9.0 270 < th dose independent rect. 15 14
37 15.45 radiation 1.0 270 < th dose dependent rect. 5 21
38 15.46 temperature 15.0 90 > th dose independent rect. 2 19
41 15.47 humidity 50.0 270 > th dose independent rect. 5 10
49 15.51 wind 9.0 90 < th dose independent rect. 7 10
54 15.52 wind 5.0 90 < th dose independent rect. 21 5
57 15.52 atmosphere 995.0 270 > th dose independent rect. 15 14
64 15.53 temperature 10.0 90 > th dose independent rect. 21 5
65 15.53 temperature 30.0 90 < th dose independent rect. 21 5
66 15.53 humidity 50.0 90 > th dose independent rect. 21 5
69 15.53 atmosphere 995.0 90 > th dose independent rect. 21 5
70 15.53 radiation 1.0 90 < th dose independent rect. 21 5
75 15.53 humidity 50.0 90 > th dose independent rect. 7 10
77 15.53 atmosphere 1015.0 90 < th dose independent rect. 2 19
81 15.53 radiation 1.0 90 < th dose dependent rect. 21 5
86 15.53 wind 9.0 90 < th dose dependent rect. 2 19
88 15.54 temperature 15.0 270 > th dose independent rect. 24 21
91 15.55 precipitation 0.1 90 < th dose independent rect. 21 5
92 15.55 precipitation 0.1 90 < th dose independent rect. 2 19
96 15.55 precipitation 0.1 90 < th dose dependent rect. 21 5
98 15.55 precipitation 0.1 90 < th dose dependent rect. 2 19
99 15.56 temperature 10.0 90 > th dose independent rect. 7 10
100 15.56 atmosphere 1015.0 90 < th dose independent rect. 7 10
101 15.56 precipitation 0.1 90 < th dose independent rect. 7 10
102 15.56 temperature 10.0 90 > th dose independent rect. 17 14
103 15.56 atmosphere 995.0 90 > th dose independent rect. 17 14
104 15.56 radiation 30.0 90 < th dose independent rect. 17 14
110 15.56 precipitation 0.1 90 < th dose dependent rect. 7 10
111 15.56 radiation 40.0 90 < th dose dependent rect. 17 14
112 15.57 radiation 10.0 1440 > th dose independent rect. 11 1
113 15.57 humidity 60.0 14400 > th dose independent rect. 3 5
120 15.58 wind 9.0 270 < th dose dependent rect. 21 3
124 15.59 humidity 70.0 4320 > th dose independent rect. 22 5
141 15.59 atmosphere 995.0 90 > th dose independent rect. 2 19
149 15.60 wind 7.0 270 < th dose independent rect. 21 3
151 15.60 temperature 10.0 270 > th dose independent rect. 21 3
152 15.60 temperature 30.0 270 < th dose independent rect. 21 3
153 15.60 humidity 50.0 270 > th dose independent rect. 21 3
156 15.60 atmosphere 995.0 270 > th dose independent rect. 21 3
157 15.60 radiation 1.0 270 < th dose independent rect. 21 3
168 15.60 precipitation 0.1 270 < th dose independent rect. 24 21
169 15.60 radiation 1.0 270 < th dose dependent rect. 21 3
176 15.60 humidity 50.0 10 > th dose dependent rect. 8 18
177 15.60 humidity 50.0 90 > th dose dependent rect. 7 19
179 15.60 precipitation 0.1 270 < th dose dependent rect. 24 21
180 15.61 wind 9.0 90 < th dose independent rect. 17 14
187 15.62 precipitation 0.1 270 < th dose independent rect. 21 3
190 15.62 wind 9.0 90 < th dose independent rect. 2 19
191 15.62 precipitation 0.1 10 < th dose independent rect. 2 19
192 15.62 precipitation 0.1 270 < th dose dependent rect. 21 3
196 15.62 precipitation 0.1 10 < th dose dependent rect. 2 19
227 15.64 wind 1.0 90 > th dose independent rect. 7 10
228 15.64 precipitation 0.1 90 < th dose independent rect. 17 14
230 15.64 atmosphere 1015.0 270 < th dose independent rect. 24 21
233 15.64 precipitation 0.1 90 < th dose dependent rect. 17 14
236 15.65 temperature 10.0 1440 > th dose independent rect. 22 5
239 15.65 temperature 30.0 1440 < th dose independent rect. 22 5
243 15.65 humidity 50.0 1440 > th dose independent rect. 22 5
251 15.65 atmosphere 995.0 1440 > th dose independent rect. 22 5
252 15.65 radiation 1.0 1440 < th dose independent rect. 22 5
274 15.65 temperature 10.0 1440 > th dose independent rect. 3 19
282 15.65 radiation 1.0 1440 < th dose dependent rect. 22 5
287 15.65 radiation 40.0 43200 < th dose dependent rect. 22 5
305 15.66 radiation 40.0 270 < th dose dependent rect. 15 14
336 15.68 humidity 50.0 90 > th dose independent rect. 17 14
339 15.68 wind 5.0 90 < th dose independent rect. 2 19
391 15.70 humidity 50.0 270 > th dose dependent rect. 20 18
392 15.70 wind 9.0 10 < th dose dependent rect. 2 19
423 15.71 atmosphere 995.0 90 > th dose independent rect. 7 10
454 15.72 humidity 90.0 10 > th dose independent rect. 22 4
475 15.73 humidity 50.0 10 > th dose independent rect. 7 10
480 15.73 wind 7.0 10 < th dose independent rect. 2 19
507 15.74 temperature 10.0 270 > th dose dependent rect. 21 3
516 15.74 humidity 50.0 90 > th dose dependent rect. 7 10
517 15.74 temperature 10.0 90 > th dose dependent rect. 17 14
519 15.74 humidity 50.0 270 > th dose dependent rect. 19 20
531 15.75 wind 9.0 270 < th dose independent rect. 24 21
532 15.75 atmosphere 995.0 270 > th dose independent rect. 24 21
550 15.76 wind 1.0 270 > th dose independent rect. 5 10
561 15.77 wind 1.0 270 > th dose independent rect. 15 14
568 15.78 wind 5.0 90 < th dose independent rect. 2 5
576 15.78 wind 9.0 270 < th dose independent rect. 5 21
591 15.79 atmosphere 1015.0 90 < th dose independent rect. 21 5
639 15.79 radiation 1.0 270 < th dose dependent rect. 9 16
645 15.79 temperature 10.0 30 > th dose dependent rect. 2 19
654 15.80 temperature 10.0 90 > th dose dependent rect. 21 5
685 15.81 atmosphere 1015.0 90 < th dose dependent rect. 21 5
688 15.81 humidity 50.0 10 > th dose dependent rect. 8 9
696 15.81 humidity 50.0 270 > th dose dependent rect. 5 21
699 15.82 atmosphere 1005.0 270 > th dose independent rect. 2 3
742 15.83 atmosphere 1005.0 90 > th dose independent rect. 2 5
743 15.83 precipitation 0.1 90 < th dose independent rect. 2 5
748 15.83 wind 9.0 90 < th dose independent rect. 7 19
755 15.83 precipitation 0.1 90 < th dose dependent rect. 2 5
764 15.84 wind 5.0 270 < th dose independent rect. 2 3
766 15.84 precipitation 0.1 270 < th dose independent rect. 2 3
804 15.84 wind 9.0 270 < th dose dependent rect. 2 3
805 15.84 precipitation 0.1 270 < th dose dependent rect. 2 3
806 15.84 wind 9.0 90 < th dose dependent rect. 2 5
950 15.86 atmosphere 1010.0 90 < th dose independent rect. 2 5
954 15.86 radiation 10.0 10 < th dose independent rect. 17 14
961 15.86 radiation 1.0 270 < th dose independent rect. 5 21