BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0133800 Os09g0133800|AK069372
         (661 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34730.1  | chr2:14654611-14657443 FORWARD LENGTH=826          166   3e-41

>AT2G34730.1 | chr2:14654611-14657443 FORWARD LENGTH=826
          Length = 825

 Score =  166 bits (420), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 162/594 (27%), Positives = 278/594 (46%), Gaps = 71/594 (11%)

Query: 109 EIYNLRQQLVTLSKSLLNSEWGLSVSHYNNFEGAEDESKHRGNEKSSKDGITKENGSKGS 168
           EI  LRQ+L  + KS L+ E G       + +  E   +      +S   +  ENG    
Sbjct: 251 EITGLRQELEAIRKSFLDHENGDEAGEVGDRKRVEQLHRKMSGSLNSVSSVW-ENGKHEE 309

Query: 169 NEDIFIDP--TVLKHMDRDELVAHFNKMMNQMKRQHDSTLQEKTEEIFRLKRE--NLKKE 224
           +    I      L+HM  DE++ HF   MN+MKR HD  +QE TE+ F  KR+  NL + 
Sbjct: 310 SSTGLIPEHNETLRHMSPDEMINHFKIEMNKMKRDHDYKIQELTEQCFTFKRKYLNLTER 369

Query: 225 GPNPWHLRNNKEFELMRKKIWEVITKLDEVLVENKRTI-RIKSDVFPGQQDKIKVVDSHN 283
           G   + +  +KE   ++KKI  VI+KLD++L+E+++ +   K+D   G + ++  +   N
Sbjct: 370 GSFSF-VGKDKELGALKKKIPFVISKLDKILMEDEKFVSEGKNDA--GLKRQLDSLLLEN 426

Query: 284 HQLQGAPTDNEEEECTTLIKASHFTPIETNYLNQIRRLESDIEDASIVTIVREETEKILV 343
            QL+ + +D  E       K S  +  E ++   IR+LE+D+ED+     + E+     V
Sbjct: 427 RQLKDSLSDAAE-------KMSQLSQAEADHQELIRKLETDVEDSRNEASIYEDVYGCFV 479

Query: 344 TEFISEIKMGLHGYEMEFNM--------------------NLDF-------------WSI 370
           TEF+ +IK      ++E +M                      DF              S+
Sbjct: 480 TEFVGQIKCTKQETDLEHSMLREAYELLLEDLARKEARKSKEDFEDSCVKSVMMEECCSV 539

Query: 371 IQKEAIAEAASNINSFLLKYSEENSCAEAQSLHMQEMDKLKLNVDTFNLVIREKEEYLSQ 430
           I KEA+ EA   I    L  +E+     ++   M + ++LK  +     +++EKE  +  
Sbjct: 540 IYKEAVKEAHKKIVELNLHVTEKEGTLRSE---MVDKERLKEEIHRLGCLVKEKENLVQT 596

Query: 431 IE--FKAIEDHLDFLRHELDSLRGKVAKQDSGISDKCRDFDVIVSRLEQALQHVHRNEIA 488
            E         ++ +  +++ L+ +V +Q++ I DK     V+ +R    L+ V   E  
Sbjct: 597 AENNLATERKKIEVVSQQINDLQSQVERQETEIQDKIEALSVVSAR---ELEKVKGYETK 653

Query: 489 LKELNDRFRTVSDSQKEVEKQNKVLHAIIKEKEKGFSSSISKE--KEFTECMRCVVES-- 544
           +  L +      +S KE++ + +      K +EK   +   KE  K+    +  VV    
Sbjct: 654 ISSLREELELARESLKEMKDEKR------KTEEKLSETKAEKETLKKQLVSLDLVVPPQL 707

Query: 545 MRGFEKLVTDQQTIIAHKVQHNESRFSLLKEQCKILAKEGNTLRKKALRYKEISETRASN 604
           ++GF+ L    + +IA K Q   SR   ++ Q   L+ + N ++ KA  YK+  E +  +
Sbjct: 708 IKGFDIL----EGLIAEKTQKTNSRLKNMQSQLSDLSHQINEVKGKASTYKQRLEKKCCD 763

Query: 605 LQKXXXXXXXXXXXXXXXTDLLAKIYIALDHYSPVLQYYTGVMEILNMIKKHLN 658
           L+K                DLL KIYIALDHYSP+L++Y G++EIL ++++ L+
Sbjct: 764 LKKAEAEVDLLGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILRLVRRELS 817




 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 41/56 (73%)

Query: 34 IVDDLDAIWNELNTSLHVSRYVTDSVMKGTISAVEQESARQIASKDAEIAFLNEKL 89
           ++DLD+ W ++N  L +SR V+DS+++G ++A+E ++A +IA KD E++ + E L
Sbjct: 40 FLEDLDSYWEDINDRLTISRVVSDSIIRGMVTAIESDAAEKIAQKDLELSKIRETL 95



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.313    0.129    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,473,929
Number of extensions: 578702
Number of successful extensions: 2204
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2207
Number of HSP's successfully gapped: 5
Length of query: 661
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 556
Effective length of database: 8,227,889
Effective search space: 4574706284
Effective search space used: 4574706284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)