Os09g0109800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Citrate transporter family protein.
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Os09g0109800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Citrate transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.21 | 0.294 | 11.9 | -0.716 | 0.252 | -0.795 | 0.0516 | 0.202 | -0.441 | 14.3 | 20.35 | 1871 | -- | -- |
| 39.31 | 0.292 | 11.9 | -0.735 | 0.259 | -0.829 | 0.0816 | -- | -0.444 | 14.2 | 20.3 | 1850 | -- | -- |
| 38.77 | 0.29 | 11.8 | -0.624 | 0.226 | -0.754 | -- | 0.284 | -0.4 | 13.8 | 20.6 | 2855 | -- | -- |
| 38.8 | 0.29 | 11.9 | -0.65 | 0.225 | -0.832 | -- | -- | -0.426 | 13.6 | 20 | 2924 | -- | -- |
| 41.58 | 0.3 | 11.8 | -0.628 | -- | -0.783 | -- | 0.241 | -0.406 | -- | 20.5 | 2617 | -- | -- |
| 53.06 | 0.341 | 11.9 | -1.11 | 0.258 | -- | 0.053 | -- | -0.635 | 14 | -- | -- | -- | -- |
| 53.07 | 0.341 | 11.9 | -1.11 | 0.258 | -- | -- | -- | -0.634 | 14 | -- | -- | -- | -- |
| 41.69 | 0.301 | 11.9 | -0.679 | -- | -0.809 | -- | -- | -0.426 | -- | 20.6 | 2610 | -- | -- |
| 44.21 | 0.31 | 11.8 | -- | 0.276 | -1.22 | -- | -- | -0.287 | 14.3 | 19.34 | 7754 | -- | -- |
| 57.09 | 0.353 | 11.9 | -1.12 | -- | -- | -- | -- | -0.641 | -- | -- | -- | -- | -- |
| 85.55 | 0.433 | 11.9 | -- | 0.279 | -- | -- | -- | -0.511 | 14.1 | -- | -- | -- | -- |
| 46.87 | 0.319 | 11.8 | -- | -- | -1.15 | -- | -- | -0.315 | -- | 18 | 22920 | -- | -- |
| 90.22 | 0.443 | 11.9 | -- | -- | -- | -- | -- | -0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.17 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 16 |
| 10 | 36.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 16 | 37.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 24 | 37.40 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 9 |
| 28 | 37.62 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 49 | 38.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 63 | 38.43 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 22 |
| 67 | 38.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 70 | 38.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 114 | 38.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 122 | 38.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 148 | 38.80 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 161 | 38.86 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 197 | 38.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 229 | 39.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 244 | 39.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 267 | 39.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 283 | 39.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 328 | 39.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 338 | 39.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 353 | 39.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 381 | 39.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 384 | 39.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 456 | 39.46 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 586 | 39.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 714 | 39.74 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 755 | 39.79 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 799 | 39.83 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 803 | 39.84 | temperature | 20 | 270 | > th | dose independent | sin | 10 | NA |
| 830 | 39.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 928 | 39.96 | temperature | 30 | 10 | < th | dose dependent | sin | 11 | NA |
| 999 | 40.05 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 17 |
| 1000 | 40.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 18 |