BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0109800 Os09g0109800|AK065455
         (529 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19490.1  | chr3:6754875-6758127 REVERSE LENGTH=577            625   e-179
AT1G49810.1  | chr1:18440013-18442237 REVERSE LENGTH=421          476   e-134

>AT3G19490.1 | chr3:6754875-6758127 REVERSE LENGTH=577
          Length = 576

 Score =  625 bits (1613), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 308/406 (75%), Positives = 342/406 (84%)

Query: 74  ELLDTTGNCDPLCSVDEVSSQYFEANYKPKNDXXXXXXXXXXXXXXXXXXNHSWVAEHQD 133
           +L+D++G CDPLCSVDE SS YFEANY+PK D                  NHSWVA +QD
Sbjct: 81  DLMDSSGLCDPLCSVDEPSSSYFEANYQPKTDIIKALAILAAALTGTAAINHSWVAANQD 140

Query: 134 IAMVLVFALGYAGIIFEESLAFNKSGVGLLMAVCLWVIRSIGAPSTDVAVQELSHTTAEV 193
           +AM L+F +GYAGIIFEESLAFNKSG+GLLMAV LWV+RSIGAPST++AV +L H TAEV
Sbjct: 141 VAMALLFGIGYAGIIFEESLAFNKSGIGLLMAVSLWVVRSIGAPSTEIAVLDLQHATAEV 200

Query: 194 SEIVFFLLGAMTIVEIVDAHQGFKLVTDNISTRNPRTLLWVIGFVTFFLSSILDNLTSTI 253
           SEIVFFLLGAMTIVEIVDAHQGFKLVTDNI+TR P+TLLWV+GFVTFFLSSILDNLTSTI
Sbjct: 201 SEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTSTI 260

Query: 254 VMVSLLRKLVPPSEYRKLLGAVVVISANAGGAWTPIGDVTTTMLWIHGQITTLNTMQGLF 313
           VMVSL+RKLVP SEYRKLLG VVVI+ANAGGAWTPIGDVTTTMLWIHGQI+TL TM+ LF
Sbjct: 261 VMVSLIRKLVPQSEYRKLLGGVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLF 320

Query: 314 LPSVVSLAVPLALMSLTSEANGXXXXXXXXXXXEQMAPRGQLVFAVGLGALVFVPVFKAL 373
           LPSVVSLAVPLALMSLTSE NG           E+MAPRG+LVF VGLGALVFVPVFKAL
Sbjct: 321 LPSVVSLAVPLALMSLTSEVNGKEQDPKDVLASEKMAPRGKLVFGVGLGALVFVPVFKAL 380

Query: 374 TGLPPFMGMMLGLAILWILTDAIHYGDSGRQRLKVPQALSRIDTQGVLFFLGILMSVGSL 433
           TGLPP+MG++LGL +LWILTDAIHYG+S RQ+LKVPQALSRIDTQG LFFLGIL+SV SL
Sbjct: 381 TGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSL 440

Query: 434 ESAGILRQLANYLDANIPNADLXXXXXXXXXXXXDNVPLVAATMGM 479
           E+AGILR++ANYLDANIPN +L            DNVPLVAATMGM
Sbjct: 441 EAAGILREIANYLDANIPNVELIASAIGVVSAIIDNVPLVAATMGM 486



>AT1G49810.1 | chr1:18440013-18442237 REVERSE LENGTH=421
          Length = 420

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/346 (67%), Positives = 282/346 (81%), Gaps = 3/346 (0%)

Query: 136 MVLVFALGYAGIIFEESLAFNKSGVGLLMAVCLWVIRSIGAPSTDVAVQELSHTTAEVSE 195
           M L+F +GY  IIFEESL+F+KSG+ LLMAV LWV+RSI   S ++   EL H T+EVS+
Sbjct: 1   MALLFGIGYVLIIFEESLSFSKSGIALLMAVSLWVVRSI-ETSVEIVTLELQHATSEVSQ 59

Query: 196 IVFFLLGAMTIVEIVDAHQGFKLVTDNISTRNPRTLLWVIGFVTFFLSSILDNLTSTIVM 255
           IVF++LGAMTIVEI+DAHQGFKLVTD I++R P+ LLWVIGF TFFLSS+LDNLTSTIVM
Sbjct: 60  IVFYMLGAMTIVEIIDAHQGFKLVTDCITSRKPKILLWVIGFATFFLSSVLDNLTSTIVM 119

Query: 256 VSLLRKLVPPSEYRKLLGAVVVISANAGGAWTPIGDVTTTMLWIHGQITTLNTMQGLFLP 315
           VSLLR+L+PPSEYRKLLGAVVVI+ANAGGAWTPIGDVTTTMLWIHG I+T +T++ LFLP
Sbjct: 120 VSLLRRLIPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGHISTFSTIKNLFLP 179

Query: 316 SVVSLAVPLALMSLTSEANGXXXXX--XXXXXXEQMAPRGQLVFAVGLGALVFVPVFKAL 373
           S +SL VPLALMSLTSE +G             ++ APRG+LVF VG GAL+FVP+FK+L
Sbjct: 180 SAISLVVPLALMSLTSEVHGMGLNTPPTPLLAYDRSAPRGKLVFGVGFGALLFVPLFKSL 239

Query: 374 TGLPPFMGMMLGLAILWILTDAIHYGDSGRQRLKVPQALSRIDTQGVLFFLGILMSVGSL 433
           TGLPP+MG++LGL ++WILTD IHYGD  RQ LK+P ALSRID+QG LFFLGIL+S+ SL
Sbjct: 240 TGLPPYMGILLGLGVIWILTDVIHYGDLERQHLKLPHALSRIDSQGALFFLGILLSMSSL 299

Query: 434 ESAGILRQLANYLDANIPNADLXXXXXXXXXXXXDNVPLVAATMGM 479
           ++AGIL+ +ANYLDA+I N +L            DNVPLVAATMGM
Sbjct: 300 DAAGILKVIANYLDAHIANVELIASIIGVVSAIIDNVPLVAATMGM 345



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,487,107
Number of extensions: 336952
Number of successful extensions: 720
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 718
Number of HSP's successfully gapped: 2
Length of query: 529
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 426
Effective length of database: 8,282,721
Effective search space: 3528439146
Effective search space used: 3528439146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)