Os09g0103700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, CCHC-type domain containing protein.
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Os09g0103700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, CCHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.93 | 0.27 | 10.9 | 0.601 | 0.557 | -1.41 | -0.091 | 2.82 | 0.264 | 8.79 | 0.5005 | 1941 | -- | -- |
| 34.03 | 0.272 | 10.9 | 0.665 | 0.546 | -0.625 | -0.0601 | -- | 0.223 | 8.91 | 0.1762 | 1952 | -- | -- |
| 32.95 | 0.267 | 10.9 | 0.598 | 0.556 | -1.41 | -- | 2.82 | 0.264 | 8.81 | 0.4749 | 1944 | -- | -- |
| 33.97 | 0.271 | 10.9 | 0.688 | 0.559 | -0.632 | -- | -- | 0.248 | 8.81 | 0.5455 | 1952 | -- | -- |
| 50.66 | 0.332 | 10.9 | 0.595 | -- | -1.51 | -- | 3.17 | 0.271 | -- | 0.4994 | 1942 | -- | -- |
| 38.69 | 0.292 | 10.9 | 0.863 | 0.542 | -- | -0.183 | -- | 0.212 | 8.73 | -- | -- | -- | -- |
| 38.8 | 0.292 | 10.9 | 0.857 | 0.542 | -- | -- | -- | 0.212 | 8.76 | -- | -- | -- | -- |
| 51.01 | 0.333 | 10.9 | 0.694 | -- | -0.548 | -- | -- | 0.255 | -- | 0.4812 | 2413 | -- | -- |
| 44.55 | 0.311 | 10.9 | -- | 0.552 | -0.917 | -- | -- | 0.217 | 8.79 | 1.955e-07 | 2204 | -- | -- |
| 55.45 | 0.348 | 10.9 | 0.858 | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
| 58.16 | 0.357 | 10.9 | -- | 0.544 | -- | -- | -- | 0.116 | 8.64 | -- | -- | -- | -- |
| 61.93 | 0.367 | 10.9 | -- | -- | -0.902 | -- | -- | 0.207 | -- | 4.413e-07 | 2260 | -- | -- |
| 74.87 | 0.404 | 10.9 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 4 | 31.82 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 12 | 31.93 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 27 | 32.08 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 28 | 32.08 | wind | 3.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 32 | 32.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 34 | 32.12 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 20 |
| 35 | 32.12 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 38 | 32.12 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 42 | 32.13 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 59 | 32.19 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 62 | 32.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 63 | 32.20 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 64 | 32.20 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 82 | 32.24 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 109 | 32.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 129 | 32.33 | wind | 3.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 139 | 32.34 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 148 | 32.36 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 153 | 32.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 155 | 32.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 166 | 32.39 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 170 | 32.39 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 178 | 32.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 204 | 32.43 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 205 | 32.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 16 | 21 |
| 261 | 32.47 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 264 | 32.48 | wind | 3.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 265 | 32.48 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 321 | 32.53 | wind | 3.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 346 | 32.54 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 356 | 32.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 368 | 32.56 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 6 |
| 381 | 32.57 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 431 | 32.60 | humidity | 80.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 485 | 32.65 | wind | 3.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 503 | 32.67 | wind | 3.0 | 43200 | < th | dose independent | no | NA | NA |
| 511 | 32.67 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 541 | 32.69 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 542 | 32.69 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 544 | 32.69 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 546 | 32.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 564 | 32.70 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 569 | 32.70 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 575 | 32.71 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 605 | 32.73 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 633 | 32.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 634 | 32.74 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 642 | 32.75 | wind | 3.0 | 43200 | > th | dose independent | no | NA | NA |
| 646 | 32.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 653 | 32.76 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 699 | 32.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 706 | 32.77 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 744 | 32.80 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 750 | 32.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 14 |
| 756 | 32.80 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 762 | 32.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 770 | 32.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 787 | 32.82 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 789 | 32.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 18 |
| 794 | 32.82 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 796 | 32.83 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 811 | 32.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 824 | 32.84 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 895 | 32.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 919 | 32.89 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 921 | 32.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 926 | 32.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 944 | 32.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 945 | 32.90 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 13 |
| 954 | 32.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 971 | 32.92 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 973 | 32.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 981 | 32.92 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 9 |