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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0567100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epsin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.0329) R2 : 0.00065
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0377 (0.0692) R2dN8 : 0.00084 R2N8 : 0.00065
σ : 0.619
deviance : 175.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
149.62 0.575 3.15 -0.158 0.0657 2.42 0.156 -14.8 -0.145 6.88 25 93 1.02 2.97
159.87 0.589 3.14 0.0446 0.0883 1.99 -0.0318 -- -0.0734 6.71 25.07 113 1.12 3.1
149.67 0.57 3.15 -0.156 0.0688 2.4 -- -14.6 -0.144 6.14 25.01 92 1.03 2.97
159.81 0.589 3.14 0.04 0.099 1.96 -- -- -0.0708 5.5 25.03 113 1.12 3.04
149.9 0.57 3.15 -0.154 -- 2.38 -- -14.4 -0.147 -- 25.01 95 1.03 3.01
172.96 0.617 3.11 0.0507 0.222 -- -0.327 -- 0.037 4.28 -- -- -- --
173.24 0.616 3.11 0.054 0.221 -- -- -- 0.0388 4.48 -- -- -- --
155.18 0.583 3.13 0.0252 -- 1.33 -- -- -0.0442 -- 24.49 119 1.17 3.02
159.85 0.589 3.14 -- 0.0997 1.96 -- -- -0.0754 5.49 25.03 113 1.13 3.04
175.86 0.62 3.11 0.0626 -- -- -- -- 0.0447 -- -- -- -- --
173.32 0.616 3.11 -- 0.222 -- -- -- 0.0328 4.47 -- -- -- --
153.67 0.577 3.14 -- -- 1.42 -- -- -0.103 -- 24.5 83 1.03 3.3
175.96 0.619 3.11 -- -- -- -- -- 0.0377 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 149.68 temperature 25.0 90 > th dose independent rect. 1 3
2 149.81 temperature 25.0 90 > th dose dependent rect. 2 2
5 151.52 atmosphere 995.0 30 > th dose independent rect. 3 23
7 152.41 temperature 25.0 270 > th dose independent rect. 1 1
13 153.42 wind 1.0 10 < th dose independent rect. 2 1
17 154.25 wind 3.0 10 < th dose dependent rect. 2 1
18 154.26 temperature 20.0 10 > th dose dependent rect. 2 1
23 154.42 humidity 90.0 30 > th dose dependent rect. 2 1
24 154.43 humidity 90.0 10 > th dose independent rect. 2 1
46 154.57 temperature 10.0 30 > th dose independent rect. 2 1
48 154.57 temperature 25.0 30 < th dose independent rect. 2 1
50 154.57 humidity 50.0 30 > th dose independent rect. 2 1
53 154.57 atmosphere 995.0 30 > th dose independent rect. 2 1
54 154.57 atmosphere 1010.0 30 < th dose independent rect. 2 1
56 154.57 radiation 1.0 30 < th dose independent rect. 2 1
61 154.57 precipitation 0.1 30 < th dose independent rect. 2 1
62 154.57 temperature 10.0 30 > th dose independent rect. 3 23
63 154.57 atmosphere 995.0 30 > th dose dependent rect. 2 1
64 154.57 atmosphere 1005.0 30 > th dose dependent rect. 2 1
65 154.57 radiation 1.0 30 < th dose dependent rect. 2 1
70 154.57 precipitation 0.1 30 < th dose dependent rect. 2 1
75 154.59 atmosphere 1015.0 30 < th dose dependent rect. 2 1
87 154.77 precipitation 0.1 30 < th dose independent rect. 3 23
88 154.77 precipitation 0.1 30 < th dose dependent rect. 3 23
91 154.80 temperature 30.0 30 < th dose dependent rect. 2 1
124 154.98 radiation 1.0 14400 < th dose dependent rect. 3 1
131 155.12 wind 9.0 1440 < th dose independent rect. 3 1
132 155.12 temperature 10.0 1440 > th dose independent rect. 3 1
135 155.12 temperature 30.0 1440 < th dose independent rect. 3 1
139 155.12 humidity 50.0 1440 > th dose independent rect. 3 1
148 155.12 atmosphere 995.0 1440 > th dose independent rect. 3 1
149 155.12 radiation 1.0 1440 < th dose independent rect. 3 1
169 155.12 temperature 10.0 1440 > th dose independent rect. 4 23
189 155.26 wind 1.0 30 > th dose independent rect. 2 1
190 155.30 wind 9.0 30 < th dose independent rect. 3 23
208 157.11 atmosphere 1005.0 10 > th dose dependent rect. 2 3
220 158.16 temperature 20.0 10 > th dose dependent rect. 2 3
232 159.12 humidity 50.0 30 > th dose independent rect. 3 23
255 160.24 temperature 25.0 1440 < th dose independent rect. 1 1
286 161.61 temperature 30.0 30 < th dose independent rect. 3 23
312 162.13 temperature 30.0 90 > th dose dependent rect. 10 1
316 162.18 atmosphere 1015.0 30 < th dose independent rect. 3 23
362 162.80 wind 3.0 10 < th dose dependent rect. 22 5
367 162.96 atmosphere 1005.0 10 > th dose independent rect. 2 3
368 162.96 wind 1.0 10 > th dose independent rect. 5 23
377 163.12 wind 1.0 10 > th dose independent sin 16 NA
421 163.89 humidity 90.0 10 > th dose independent rect. 24 3
422 163.89 wind 1.0 10 < th dose independent rect. 14 13
441 164.01 wind 1.0 10 < th dose independent rect. 12 15
449 164.13 temperature 20.0 10 > th dose independent rect. 2 3
462 164.20 wind 3.0 10 < th dose dependent rect. 16 11
469 164.27 humidity 80.0 4320 < th dose dependent rect. 1 1
487 164.42 radiation 20.0 30 < th dose dependent rect. 3 23
531 164.68 temperature 25.0 720 < th dose independent rect. 21 5
546 164.84 wind 3.0 10 < th dose dependent rect. 11 16
548 164.86 wind 1.0 10 > th dose independent rect. 16 12
553 164.89 wind 9.0 30 < th dose dependent rect. 3 23
555 164.91 wind 3.0 270 < th dose independent rect. 22 5
556 164.92 humidity 90.0 90 < th dose independent rect. 2 1
613 165.21 temperature 30.0 10 > th dose dependent rect. 11 2
647 165.43 temperature 30.0 90 > th dose independent rect. 10 1
649 165.43 atmosphere 995.0 10 > th dose independent rect. 5 21
661 165.49 wind 7.0 720 < th dose independent rect. 3 8
678 165.56 radiation 10.0 10 < th dose independent rect. 3 23
682 165.56 humidity 50.0 30 > th dose dependent rect. 3 23
704 165.72 atmosphere 995.0 90 > th dose independent rect. 14 11
726 165.78 wind 5.0 270 < th dose dependent rect. 22 5
733 165.83 humidity 80.0 4320 < th dose independent rect. 1 1
756 165.94 atmosphere 995.0 10 > th dose independent rect. 14 12
767 165.98 radiation 10.0 10 < th dose independent rect. 5 21
771 165.98 radiation 20.0 10 < th dose dependent rect. 5 21
781 166.02 humidity 80.0 4320 > th dose independent rect. 1 1
802 166.11 temperature 25.0 270 < th dose independent sin 9 NA
810 166.13 wind 1.0 10 > th dose independent rect. 14 14
834 166.23 wind 1.0 10 > th dose independent rect. 16 10
835 166.23 wind 1.0 10 > th dose independent rect. 16 19
850 166.28 wind 3.0 10 < th dose dependent rect. 11 18
853 166.30 atmosphere 995.0 10 > th dose independent sin 6 NA
861 166.33 temperature 30.0 90 < th dose independent rect. 3 8
880 166.38 temperature 25.0 270 < th dose independent rect. 21 12
891 166.42 precipitation 0.1 10 < th dose independent rect. 2 3
892 166.42 precipitation 0.1 10 < th dose dependent rect. 2 3
910 166.44 wind 1.0 10 > th dose independent rect. 14 12
920 166.49 atmosphere 995.0 10 < th dose independent sin 6 NA
921 166.49 atmosphere 995.0 30 < th dose independent rect. 18 23
922 166.49 atmosphere 995.0 10 < th dose dependent sin 6 NA
934 166.50 atmosphere 995.0 90 < th dose dependent rect. 18 21
948 166.53 atmosphere 995.0 90 < th dose independent rect. 18 21
958 166.55 atmosphere 1000.0 90 < th dose dependent rect. 14 1
969 166.59 wind 9.0 10 < th dose independent rect. 5 21
974 166.60 temperature 10.0 10 > th dose independent rect. 2 3
976 166.60 temperature 30.0 10 < th dose independent rect. 2 3
977 166.60 humidity 50.0 10 > th dose independent rect. 2 3
980 166.60 atmosphere 995.0 10 > th dose independent rect. 2 3
981 166.60 atmosphere 1010.0 10 < th dose independent rect. 2 3
983 166.60 radiation 1.0 10 < th dose independent rect. 2 3
989 166.60 temperature 10.0 10 > th dose independent rect. 5 21
991 166.60 radiation 10.0 10 < th dose dependent rect. 2 3