Os08g0548500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os08g0548500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.32 | 0.528 | 2.91 | -0.0496 | 0.22 | 3.75 | -0.239 | 6.1 | 0.102 | 5.23 | 9.1 | 264 | -- | -- |
| 132.8 | 0.537 | 2.87 | 0.0576 | 0.29 | 3.42 | -0.132 | -- | 0.168 | 4.94 | 9.222 | 249 | -- | -- |
| 126.46 | 0.524 | 2.91 | -0.0505 | 0.218 | 3.76 | -- | 6.32 | 0.102 | 5.39 | 9.111 | 265 | -- | -- |
| 128.11 | 0.527 | 2.87 | -0.107 | 0.252 | 2.32 | -- | -- | 0.125 | 4.7 | 9.2 | 269 | -- | -- |
| 128.87 | 0.529 | 2.92 | -0.0524 | -- | 3.64 | -- | 6.35 | 0.104 | -- | 9.196 | 264 | -- | -- |
| 144.44 | 0.563 | 2.9 | -0.257 | 0.13 | -- | 0.249 | -- | 0.0509 | 6.41 | -- | -- | -- | -- |
| 144.57 | 0.563 | 2.9 | -0.255 | 0.133 | -- | -- | -- | 0.0497 | 5.82 | -- | -- | -- | -- |
| 115.06 | 0.5 | 2.9 | -0.179 | -- | 3.92 | -- | -- | 0.0828 | -- | 10.95 | 294 | -- | -- |
| 114.02 | 0.497 | 2.89 | -- | 0.19 | 4.04 | -- | -- | 0.0986 | 5.06 | 11.5 | 244 | -- | -- |
| 145.48 | 0.564 | 2.9 | -0.251 | -- | -- | -- | -- | 0.0528 | -- | -- | -- | -- | -- |
| 146.28 | 0.566 | 2.89 | -- | 0.129 | -- | -- | -- | 0.0781 | 5.92 | -- | -- | -- | -- |
| 115.9 | 0.501 | 2.89 | -- | -- | 3.96 | -- | -- | 0.103 | -- | 11.4 | 267 | -- | -- |
| 147.14 | 0.566 | 2.9 | -- | -- | -- | -- | -- | 0.0806 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.30 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 3 | 110.49 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 2 |
| 66 | 118.47 | wind | 9 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 68 | 118.53 | wind | 9 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 77 | 118.72 | wind | 9 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 92 | 119.16 | wind | 9 | 270 | > th | dose independent | rect. | 21 | 19 |
| 97 | 119.43 | wind | 9 | 270 | > th | dose independent | rect. | 1 | 15 |
| 123 | 120.77 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 13 |
| 188 | 121.78 | wind | 9 | 270 | > th | dose dependent | sin | 3 | NA |
| 208 | 122.67 | wind | 9 | 270 | > th | dose independent | sin | 2 | NA |
| 278 | 123.09 | wind | 9 | 270 | < th | dose independent | sin | 2 | NA |
| 291 | 123.28 | wind | 9 | 90 | > th | dose dependent | rect. | 12 | 14 |
| 303 | 123.34 | wind | 9 | 90 | > th | dose dependent | rect. | 12 | 10 |
| 590 | 126.40 | wind | 9 | 30 | < th | dose independent | sin | 17 | NA |
| 602 | 126.47 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 615 | 126.47 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 707 | 126.66 | wind | 9 | 270 | > th | dose dependent | no | NA | NA |
| 726 | 126.66 | wind | 9 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 843 | 126.83 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 859 | 126.83 | wind | 9 | 270 | > th | dose independent | rect. | 1 | 22 |
| 967 | 127.05 | wind | 9 | 270 | < th | dose independent | no | NA | NA |
| 968 | 127.05 | wind | 9 | 270 | > th | dose dependent | rect. | 15 | 23 |