BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0548500 Os08g0548500|AK070951
(646 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652 676 0.0
AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665 382 e-106
AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671 328 6e-90
AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616 196 4e-50
>AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652
Length = 651
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/649 (54%), Positives = 430/649 (66%), Gaps = 8/649 (1%)
Query: 2 DDLKAILARPIQLAEQVIKWAEEAQTCRQECLDLKAKVEXXXXXXXXXXXXXX--YERPA 59
D +K ILA+PIQL++QV+K A+EA + +QEC +LKAK E YERP
Sbjct: 3 DIVKQILAKPIQLSDQVVKAADEASSFKQECGELKAKTEKLAGLLRQAARASNDLYERPT 62
Query: 60 RRIXXXXXXXXXXXXXXXXRCRGHGLIRRVFTIIPAGSFKKTSNQLDNSLGDLSWILRVS 119
RRI +CR +GL++RVFTIIPA +F+K S QL+NS+GD+SW+LRVS
Sbjct: 63 RRIIDDTEQMLEKALSLVLKCRANGLMKRVFTIIPAAAFRKMSGQLENSIGDVSWLLRVS 122
Query: 120 NYSNADDLDDDHIGLPPIAQNEPILFLIWEQIAVLYTGNPEARADAAASIVSLARDNDRY 179
+ D D ++GLPPIA NEPIL LIWEQIA+LYTG+ E R+DAAAS+VSLARDNDRY
Sbjct: 123 APAE-DRGDAGYLGLPPIAANEPILCLIWEQIAILYTGSLEDRSDAAASLVSLARDNDRY 181
Query: 180 GRLIIEEDGVPPLLRLIKEGSSEGQETAALAIGLLGRDPECVELMVLAGVCTAFAKILKD 239
+LIIEE GV PLL+L+KEG EGQE AA A+GLLGRDPE VE M+ G C+ F K+LK+
Sbjct: 182 TKLIIEEGGVVPLLKLLKEGKPEGQENAARALGLLGRDPESVEHMIHGGACSVFGKVLKE 241
Query: 240 APMKVQGMVAWAVSELATNHPKCQDAFLQSNVIRLLVSHLAFETVQEHSKYAVASK---M 296
PMKVQ +VAWA SEL +NHPKCQD F Q N IRLLV HLAFETVQEHSKYA+A+
Sbjct: 242 GPMKVQAVVAWATSELVSNHPKCQDVFAQHNAIRLLVGHLAFETVQEHSKYAIATNNKAT 301
Query: 297 SIHTVLMDKKNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 356
SIH + K N
Sbjct: 302 SIHHAVALAKENPNSTSATALPKGLDEDQSSIPHPTGKQMPNQMHNVVVNTMAVRANPPR 361
Query: 357 XXXXXXXXXXXXXXXXXXXKQHNASLSGTSTKAREFEDPETXXXXXXXXXXXXWQLAMGN 416
+QH S S +++K RE ED T W+LA GN
Sbjct: 362 KSTSNGVSQSNGVKQPSSVQQHQNSTS-SASKTRELEDSATKCQIKAMAARALWKLAKGN 420
Query: 417 AAVCKNITESRALLCLSVLLEKGVDDVRYNSAMALMEICLVAEQNADLRRSAFKPTSPAA 476
+ +CK+ITESRALLC +VL+EKG ++VRYNSAMALMEI VAEQ+ADLRRSAFKP SPA
Sbjct: 421 STICKSITESRALLCFAVLIEKGDEEVRYNSAMALMEITAVAEQDADLRRSAFKPNSPAC 480
Query: 477 RAVVDQLLRVVHKADYDELLIPCIISLGCLSRTFRATETRIIGPLVNLLDEREADVSREA 536
+AVVDQ+LR++ AD ELLIPCI ++G L+RTFRATETR+IGPLV LLDERE +V+ EA
Sbjct: 481 KAVVDQVLRIIEIAD-SELLIPCIRTIGNLARTFRATETRMIGPLVKLLDEREPEVTGEA 539
Query: 537 AAALTKFACTENYLHVDHSKAIIHHGGAKHLVQLVYFAEQAVQIAALLLVCYIAHNVPDN 596
AAALTKFACT NYLH DHS+ II GG KHLVQL YF E VQI AL L+CYIA NVPD+
Sbjct: 540 AAALTKFACTANYLHKDHSRGIIEAGGGKHLVQLAYFGEGGVQIPALELLCYIALNVPDS 599
Query: 597 EELAQAEILTLLEWASKQAAMVQDPLIENLLLEAKIRMELYQSRGAKGY 645
E+LA+ E+L +LEWASKQ+ + Q +E LL EAK ++LYQ RG++GY
Sbjct: 600 EQLAKDEVLAVLEWASKQSWVTQLESLEALLQEAKRGLDLYQQRGSRGY 648
>AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665
Length = 664
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/321 (60%), Positives = 233/321 (72%), Gaps = 15/321 (4%)
Query: 2 DDLKAILARPIQLAEQVIKWAEEAQTCRQECLDLKAKVEXXXXXXXXXXXXXX--YERPA 59
D +K IL RPIQLA+Q+ K ++EA + RQECL++KAK E YERP
Sbjct: 3 DIVKQILVRPIQLADQITKASDEAYSFRQECLEVKAKTEKLAGLLRQAARASNDLYERPT 62
Query: 60 RRIXXXXXXXXXXXXXXXXRCRGHGLIRRVFTIIPAGSFKKTSNQLDNSLGDLSWILRVS 119
RRI +CR GL++RVFTIIPA +F+K + QL+NS+GD+SW+LRVS
Sbjct: 63 RRIIDDTEQVLFKALALVEKCRATGLMKRVFTIIPAAAFRKITMQLENSIGDVSWLLRVS 122
Query: 120 NYSNADDLDDDHIGLPPIAQNEPILFLIWEQIAVLYTGNPEARADAAASIVSLARDNDRY 179
++ DD DD+++GLPPIA NEPIL LIWEQ+A+L+TG+ + R+DAAAS+VSLARDNDRY
Sbjct: 123 --ASGDDRDDEYLGLPPIAANEPILCLIWEQVAILFTGSLDDRSDAAASLVSLARDNDRY 180
Query: 180 GRLIIEEDGVPPLLRLIKEGSSEGQETAALAIGLLGRDPECVELMVLAGVCTAFAKILKD 239
GRLIIEE GVP LL+L KEG EGQE AA AIGLLGRDPE VE +V AGVC FAKILK+
Sbjct: 181 GRLIIEEGGVPSLLKLAKEGKMEGQENAARAIGLLGRDPESVEQIVNAGVCQVFAKILKE 240
Query: 240 APMKVQGMVAWAVSELATNHPKCQDAFLQSNVIRLLVSHLAFETVQEHSKYAVASKM--- 296
MKVQ +VAWAVSELA+NHPKCQD F Q+N+IR LVSHLAFETVQEHSKYA+ S
Sbjct: 241 GHMKVQTVVAWAVSELASNHPKCQDHFAQNNIIRFLVSHLAFETVQEHSKYAIVSNKQTL 300
Query: 297 -SIHTVLM-------DKKNNG 309
SIHTV+M DKK N
Sbjct: 301 SSIHTVVMASNTNPADKKENN 321
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 211/268 (78%), Gaps = 1/268 (0%)
Query: 379 NASLSGTSTKAREFEDPETXXXXXXXXXXXXWQLAMGNAAVCKNITESRALLCLSVLLEK 438
+ SL GTS K RE+EDP T WQL+ GN +C++ITESRALLC +VLLEK
Sbjct: 398 HVSLMGTSIKGREYEDPATKAQMKAMAARALWQLSRGNLQICRSITESRALLCFAVLLEK 457
Query: 439 GVDDVRYNSAMALMEICLVAEQNADLRRSAFKPTSPAARAVVDQLLRVVHKADYDELLIP 498
G D+V+ SA+A+MEI VAEQ +LRRSAFKPTSPAA+AVV+QLL+V+ D LLIP
Sbjct: 458 GDDEVKSYSALAMMEITDVAEQYPELRRSAFKPTSPAAKAVVEQLLKVIENEILD-LLIP 516
Query: 499 CIISLGCLSRTFRATETRIIGPLVNLLDEREADVSREAAAALTKFACTENYLHVDHSKAI 558
CI S+G LSRTFRATETRIIGPLV LLDEREA+++ EAA AL KF+CTEN+L +HSKAI
Sbjct: 517 CIKSIGSLSRTFRATETRIIGPLVKLLDEREAEIAMEAAVALIKFSCTENFLRDNHSKAI 576
Query: 559 IHHGGAKHLVQLVYFAEQAVQIAALLLVCYIAHNVPDNEELAQAEILTLLEWASKQAAMV 618
I GGAKHL+QLVYF EQ VQ+ AL+L+CYIA NVPD+E LAQ E+L +LEW++KQA +V
Sbjct: 577 IAAGGAKHLIQLVYFGEQMVQVPALMLLCYIALNVPDSETLAQEEVLVVLEWSTKQAHLV 636
Query: 619 QDPLIENLLLEAKIRMELYQSRGAKGYY 646
+ P I+ +L EAK R+ELYQSRG++G++
Sbjct: 637 EAPTIDEILPEAKSRLELYQSRGSRGFH 664
>AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671
Length = 670
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 179/314 (57%), Positives = 216/314 (68%), Gaps = 8/314 (2%)
Query: 1 MDDL-KAILARPIQLAEQVIKWAEEAQTCRQECLDLKAKVEXXXXXXXXXXXXXX--YER 57
M DL K IL+RPIQLA+QV+K +EA +QEC D+K+K E YER
Sbjct: 1 MGDLAKQILSRPIQLADQVVKAGDEATINKQECADIKSKTEKLAALLRQAARASSDLYER 60
Query: 58 PARRIXXXXXXXXXXXXXXXXRCRGHGLIRRVFTIIPAGSFKKTSNQLDNSLGDLSWILR 117
P RRI RCR G I R+F IIPA +F+K +QL+NS+GD+SW+LR
Sbjct: 61 PTRRILDDTENVLEKALTMVQRCRDDGYIMRLFNIIPAAAFRKMISQLENSVGDVSWLLR 120
Query: 118 VSN-YSNADDLDDDHIGLPPIAQNEPILFLIWEQIAVLYTGNPEARADAAASIVSLARDN 176
VS N DD ++GLPPIA NEPIL LIWEQIAVL TG+PE ++DAAAS+ SLARDN
Sbjct: 121 VSTPAGNDDDEGFGYLGLPPIAANEPILCLIWEQIAVLMTGSPEDKSDAAASLASLARDN 180
Query: 177 DRYGRLIIEEDGVPPLLRLIKEGSSEGQETAALAIGLLGRDPECVELMVLAGVCTAFAKI 236
DRY +LI+EE GV PLL+L+KEG +GQE AA IGLLGRDPE VE M+ GVC+ + I
Sbjct: 181 DRYVKLIVEEGGVNPLLKLVKEGKIDGQENAARTIGLLGRDPESVEHMIQLGVCSVLSSI 240
Query: 237 LKDAPMKVQGMVAWAVSELAT-NHPKCQDAFLQSNVIRLLVSHLAFETVQEHSKYAVASK 295
LK+ MKVQ +VAWAVSEL + NH KCQ+ F Q+NVIRLLVSHLAFETVQEHSKYAV +
Sbjct: 241 LKEGSMKVQAVVAWAVSELVSGNHAKCQELFAQNNVIRLLVSHLAFETVQEHSKYAVVAG 300
Query: 296 MSI---HTVLMDKK 306
+ H V+M K
Sbjct: 301 RATSMHHAVVMASK 314
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/267 (54%), Positives = 200/267 (74%), Gaps = 1/267 (0%)
Query: 381 SLSGTSTKAREFEDPETXXXXXXXXXXXXWQLAMGNAAVCKNITESRALLCLSVLLEKGV 440
S + + T+ RE EDP T W+LA+GN+++C+ ITESRALLC +VLL+KG
Sbjct: 403 SRNASVTRGRELEDPVTKTYMKAMAARALWKLAVGNSSICRVITESRALLCFAVLLDKGD 462
Query: 441 DDVRYNSAMALMEICLVAEQNADLRRSAFKPTSPAARAVVDQLLRVVHKADY-DELLIPC 499
++ +YN+AMA+MEI VAE+NADLRRSAF+ TSPA +AVVDQL R+V AD +LLIPC
Sbjct: 463 EETKYNTAMAIMEITAVAEENADLRRSAFRRTSPACKAVVDQLFRIVENADAGSDLLIPC 522
Query: 500 IISLGCLSRTFRATETRIIGPLVNLLDEREADVSREAAAALTKFACTENYLHVDHSKAII 559
+ S+G L+RTF++ ET +I PLV LLD+ E D++ E A AL KFA +N+L +HS+ II
Sbjct: 523 VRSIGNLARTFKSAETHMIVPLVKLLDDGEPDLAAEVAIALAKFATEDNFLGKEHSRTII 582
Query: 560 HHGGAKHLVQLVYFAEQAVQIAALLLVCYIAHNVPDNEELAQAEILTLLEWASKQAAMVQ 619
GG+K LVQL YF E QI A++L+ Y+A NVPD+E+LA+ E+LT+LEW+SKQA +++
Sbjct: 583 EAGGSKLLVQLAYFGENGAQIPAMVLLSYVAMNVPDSEQLAKDEVLTVLEWSSKQANVLE 642
Query: 620 DPLIENLLLEAKIRMELYQSRGAKGYY 646
D +E LL EAK R+ELYQSRG++G++
Sbjct: 643 DEDMEALLYEAKSRLELYQSRGSRGFH 669
>AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616
Length = 615
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 1/261 (0%)
Query: 379 NASLSGTSTKAREFEDPETXXXXXXXXXXXXWQLAMGNAAVCKNITESRALLCLSVLLEK 438
+ S +G K R+ E+PE W LA GN A + ITE++ LL L+ ++EK
Sbjct: 344 SGSRTGNFKKERDNENPEVKHELKVNCAEALWMLARGNVANSRRITETKGLLSLAKIVEK 403
Query: 439 GVDDVRYNSAMALMEICLVAEQNADLRRSAFKPTSPAARAVVDQLLRVVHKADYDELLIP 498
V +++YN M LMEI AE +ADLRR+AFK SPAA+AV+DQ+L ++ D L IP
Sbjct: 404 EVGELQYNCLMTLMEITAAAESSADLRRAAFKTNSPAAKAVIDQMLWIIKDVDSPILKIP 463
Query: 499 CIISLGCLSRTFRATETRIIGPLVNLLDEREADVSREAAAALTKFACTENYLHVDHSKAI 558
I S+G L+RTF A ETR+I PLV L +V+ A +L KF C EN+L +HSK I
Sbjct: 464 AIQSIGSLARTFPARETRMIKPLVEKLGSSNQEVAITAVISLQKFVCPENFLCAEHSKNI 523
Query: 559 IHHGGAKHLVQLVYFAEQAVQIAALLLVCYIAHNVPDNEELAQAEILTLLEWASKQAAMV 618
I +G L++L+ EQ +Q+ L L+CY++ N ++++L QA++LT+LE A + A +
Sbjct: 524 IEYGAIPLLMKLIRNVEQQMQLQCLALLCYLSVNASNHQQLEQAKVLTVLEGAERLAGL- 582
Query: 619 QDPLIENLLLEAKIRMELYQS 639
Q+ + L+ +A ++ LY +
Sbjct: 583 QNMELRELVSKAIYQLSLYNA 603
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 8/277 (2%)
Query: 15 AEQVIKWAEEAQTCRQEC------LDLKAKVEXXXXXXXXXXXXXXYERPARRIXXXXXX 68
AE++ +EA++ + EC +D A++ Y+RP RR+
Sbjct: 19 AERLRVAVDEAESFKTECGEVGKQVDRLAQMLRTLVRFVSSSSQQVYDRPIRRVIVDVKK 78
Query: 69 XXXXXXXXXXRCRGHGLIRRVFTIIPAGSFKKTSNQLDNSLGDLSWILRVSNYSNADDLD 128
+CR H +IRRV TII A F+K N L++S GD+ WIL V +
Sbjct: 79 NLERGFALVRKCRRHNIIRRVCTIINAADFRKVINLLESSNGDVKWILSVFDSDGDGSFG 138
Query: 129 DD-HIGLPPIAQNEPILFLIWEQIAVLYTGNPEARADAAASIVSLARDNDRYGRLIIEED 187
I LPPIA N+PIL +W +A + G + DAA + SLA DNDR ++I++E
Sbjct: 139 GGIVISLPPIATNDPILPWVWSLVASIQMGKLVDKIDAANQLGSLAGDNDRNKKIIVDEG 198
Query: 188 GVPPLLRLIKEGSS-EGQETAALAIGLLGRDPECVELMVLAGVCTAFAKILKDAPMKVQG 246
GV PLLRL+KE SS EGQ AA A+GLL D + V +V ++L D+ ++VQ
Sbjct: 199 GVSPLLRLLKESSSAEGQIAAATALGLLACDEDKVRSIVNELGVPIIVQVLGDSSVRVQI 258
Query: 247 MVAWAVSELATNHPKCQDAFLQSNVIRLLVSHLAFET 283
VA V+ +A + P QD F + +VI+ LV+ L+ +
Sbjct: 259 KVATLVARMAEHDPVAQDEFARQSVIKPLVTLLSLDV 295
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,759,300
Number of extensions: 380243
Number of successful extensions: 1034
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1029
Number of HSP's successfully gapped: 9
Length of query: 646
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 541
Effective length of database: 8,227,889
Effective search space: 4451287949
Effective search space used: 4451287949
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)