Os08g0537800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0537800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ovarian tumour, otubain domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7.89 | 0.132 | 12.1 | -0.084 | 0.482 | -0.491 | -0.354 | -0.899 | 0.0112 | 20.3 | 23.3 | 5378 | -- | -- |
| 8.18 | 0.133 | 12.1 | -0.174 | 0.487 | -0.278 | -0.35 | -- | -0.000587 | 20.3 | 36.74 | 5831 | -- | -- |
| 8.27 | 0.134 | 12.1 | -0.0735 | 0.485 | -0.482 | -- | -0.891 | 0.0151 | 20.3 | 23.28 | 5499 | -- | -- |
| 8.56 | 0.136 | 12.1 | -0.162 | 0.485 | -0.276 | -- | -- | -0.000258 | 20.3 | 34.19 | 5812 | -- | -- |
| 16.33 | 0.188 | 12.1 | -0.12 | -- | -0.627 | -- | -0.25 | -0.039 | -- | 34.7 | 613 | -- | -- |
| 9.47 | 0.144 | 12.1 | -0.0402 | 0.485 | -- | -0.338 | -- | 0.06 | 20.4 | -- | -- | -- | -- |
| 9.83 | 0.147 | 12.1 | -0.0298 | 0.486 | -- | -- | -- | 0.06 | 20.3 | -- | -- | -- | -- |
| 16.23 | 0.188 | 12.1 | -0.189 | -- | -0.658 | -- | -- | -0.0425 | -- | 146.9 | 613 | -- | -- |
| 9.05 | 0.14 | 12.1 | -- | 0.481 | -0.186 | -- | -- | 0.0364 | 20.3 | 43.4 | 4844 | -- | -- |
| 22.93 | 0.224 | 12.1 | -0.0328 | -- | -- | -- | -- | 0.0548 | -- | -- | -- | -- | -- |
| 9.85 | 0.147 | 12.1 | -- | 0.486 | -- | -- | -- | 0.0633 | 20.3 | -- | -- | -- | -- |
| 17.09 | 0.193 | 12.1 | -- | -- | -0.589 | -- | -- | -0.0131 | -- | 171 | 608 | -- | -- |
| 22.96 | 0.224 | 12.1 | -- | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 6.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 10 | 7.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 46 | 7.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 53 | 7.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 59 | 7.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 72 | 7.39 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 88 | 7.43 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 5 |
| 111 | 7.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 129 | 7.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 159 | 7.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 183 | 7.59 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 184 | 7.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 185 | 7.59 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 11 |
| 235 | 7.64 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 244 | 7.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 249 | 7.65 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 250 | 7.65 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 251 | 7.65 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 261 | 7.66 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 262 | 7.66 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 285 | 7.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 330 | 7.69 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 352 | 7.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 361 | 7.70 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 377 | 7.70 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 385 | 7.71 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 393 | 7.71 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 398 | 7.71 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 415 | 7.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 422 | 7.72 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 427 | 7.72 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 428 | 7.72 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 431 | 7.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 478 | 7.72 | radiation | 20 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 486 | 7.72 | radiation | 30 | 43200 | < th | dose dependent | rect. | 16 | 14 |
| 498 | 7.73 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 499 | 7.73 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 501 | 7.73 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 511 | 7.73 | radiation | 30 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 528 | 7.73 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 568 | 7.74 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 570 | 7.74 | radiation | 30 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 572 | 7.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 573 | 7.74 | radiation | 30 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 588 | 7.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 600 | 7.74 | radiation | 30 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 633 | 7.74 | radiation | 30 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 635 | 7.75 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 636 | 7.75 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 652 | 7.75 | humidity | 80 | 43200 | > th | dose dependent | sin | 15 | NA |
| 653 | 7.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 714 | 7.75 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 719 | 7.76 | temperature | 20 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 722 | 7.76 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 747 | 7.76 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 756 | 7.76 | temperature | 20 | 14400 | < th | dose dependent | sin | 8 | NA |
| 757 | 7.76 | humidity | 90 | 43200 | > th | dose dependent | sin | 9 | NA |
| 763 | 7.76 | radiation | 1 | 43200 | < th | dose dependent | sin | 9 | NA |
| 765 | 7.76 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 766 | 7.76 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 773 | 7.76 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 783 | 7.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 816 | 7.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 854 | 7.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 855 | 7.77 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 900 | 7.77 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 14 |
| 915 | 7.77 | radiation | 1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 939 | 7.77 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 6 |