Os08g0535000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0535000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.99 | 0.235 | 10.1 | 0.187 | 0.217 | -0.504 | 0.25 | 0.19 | 0.0982 | 2.07 | 26.9 | 1302 | -- | -- |
| 25.04 | 0.233 | 10.1 | 0.215 | 0.222 | -0.503 | 0.242 | -- | 0.112 | 1.99 | 26.4 | 1303 | -- | -- |
| 25.21 | 0.234 | 10.1 | 0.189 | 0.214 | -0.518 | -- | 0.143 | 0.0964 | 2.32 | 27.3 | 1290 | -- | -- |
| 25.22 | 0.234 | 10.1 | 0.218 | 0.216 | -0.514 | -- | -- | 0.105 | 2.38 | 26.9 | 1288 | -- | -- |
| 27.39 | 0.244 | 10.1 | 0.202 | -- | -0.586 | -- | 0.0199 | 0.0921 | -- | 27.91 | 1081 | -- | -- |
| 28.79 | 0.252 | 10.1 | 0.379 | 0.255 | -- | 0.228 | -- | 0.222 | 2.12 | -- | -- | -- | -- |
| 28.98 | 0.252 | 10.1 | 0.372 | 0.257 | -- | -- | -- | 0.221 | 2.33 | -- | -- | -- | -- |
| 27.39 | 0.244 | 10.1 | 0.205 | -- | -0.594 | -- | -- | 0.0933 | -- | 27.72 | 1079 | -- | -- |
| 26 | 0.237 | 10.1 | -- | 0.22 | -0.539 | -- | -- | 0.0788 | 2.26 | 27 | 4211 | -- | -- |
| 32.88 | 0.268 | 10.1 | 0.383 | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
| 32.63 | 0.267 | 10.1 | -- | 0.264 | -- | -- | -- | 0.179 | 2.35 | -- | -- | -- | -- |
| 28.35 | 0.248 | 10.1 | -- | -- | -0.686 | -- | -- | 0.0527 | -- | 27.57 | 1084 | -- | -- |
| 36.75 | 0.283 | 10.1 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 8 | 24.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 10 | 24.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 12 | 24.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 23 | 24.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 33 | 24.67 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 43 | 24.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 116 | 24.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 117 | 24.75 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 278 | 24.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 388 | 24.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 410 | 24.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 444 | 24.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 566 | 24.95 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 605 | 24.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 770 | 24.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 816 | 25.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |