Os08g0521800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0521800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.82 | 0.281 | 14 | -1.46 | 0.892 | 0.591 | 0.145 | -2.39 | -0.496 | 3.66 | 20.8 | 631 | -- | -- |
| 39.72 | 0.296 | 13.9 | -0.932 | 0.993 | 0.481 | 0.275 | -- | -0.354 | 2.86 | 19.95 | 712 | -- | -- |
| 35.83 | 0.279 | 14 | -1.47 | 0.911 | 0.597 | -- | -2.48 | -0.498 | 3.64 | 20.8 | 584 | -- | -- |
| 39.94 | 0.296 | 13.9 | -0.938 | 0.989 | 0.475 | -- | -- | -0.354 | 2.84 | 19.46 | 703 | -- | -- |
| 68.74 | 0.386 | 14 | -1.56 | -- | 0.683 | -- | -2.15 | -0.537 | -- | 21.22 | 1122 | -- | -- |
| 43.2 | 0.308 | 13.9 | -0.833 | 0.816 | -- | 0.174 | -- | -0.272 | 2.96 | -- | -- | -- | -- |
| 43.3 | 0.308 | 13.9 | -0.837 | 0.816 | -- | -- | -- | -0.273 | 2.94 | -- | -- | -- | -- |
| 75.68 | 0.405 | 13.9 | -1.06 | -- | 0.51 | -- | -- | -0.37 | -- | 17.02 | 5439 | -- | -- |
| 61.39 | 0.367 | 13.9 | -- | 0.853 | 0.148 | -- | -- | -0.202 | 2.9 | 19.46 | 703 | -- | -- |
| 81.63 | 0.422 | 13.9 | -0.802 | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
| 61.75 | 0.368 | 13.9 | -- | 0.8 | -- | -- | -- | -0.18 | 2.93 | -- | -- | -- | -- |
| 89.38 | 0.44 | 13.9 | -- | -- | -0.449 | -- | -- | 0.002 | -- | 20.3 | 47520 | -- | -- |
| 98.59 | 0.463 | 13.9 | -- | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 2 | 35.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 3 | 35.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 5 | 35.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 7 | 35.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 15 | 35.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 16 | 35.60 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 20 | 35.70 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 23 | 35.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 25 | 35.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 37 | 35.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 48 | 35.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 53 | 36.01 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 54 | 36.01 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 63 | 36.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 72 | 36.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 92 | 36.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 95 | 36.18 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 113 | 36.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 125 | 36.27 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 146 | 36.29 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 167 | 36.32 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 173 | 36.33 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 179 | 36.34 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 180 | 36.34 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 207 | 36.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 216 | 36.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 225 | 36.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 226 | 36.40 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 227 | 36.40 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 243 | 36.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 251 | 36.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 264 | 36.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 286 | 36.46 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 3 | NA |
| 313 | 36.48 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 315 | 36.48 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 335 | 36.50 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 367 | 36.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 474 | 36.59 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 477 | 36.59 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 478 | 36.59 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 501 | 36.60 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 517 | 36.61 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 564 | 36.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 16 |
| 581 | 36.63 | atmosphere | 1005 | 43200 | < th | dose dependent | sin | 10 | NA |
| 589 | 36.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 601 | 36.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 616 | 36.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 650 | 36.65 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 651 | 36.65 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 689 | 36.66 | atmosphere | 1010 | 43200 | < th | dose dependent | no | NA | NA |
| 750 | 36.68 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 776 | 36.68 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 779 | 36.69 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 888 | 36.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 889 | 36.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 927 | 36.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 931 | 36.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 955 | 36.75 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 957 | 36.75 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 964 | 36.75 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 994 | 36.76 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 995 | 36.76 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 24 | 1 |