Os08g0515900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0515900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.14 | 0.768 | 3.46 | -0.459 | 0.233 | -0.64 | 0.564 | 3.83 | 0.0577 | 9.83 | 7.501 | 1416 | -- | -- |
| 275.73 | 0.773 | 3.53 | -0.391 | 0.218 | -0.864 | 0.744 | -- | 0.00768 | 9.71 | 9.482 | 1460 | -- | -- |
| 267.11 | 0.761 | 3.46 | -0.479 | 0.319 | -0.623 | -- | 3.74 | 0.00945 | 10 | 4.585 | 1122 | -- | -- |
| 277.68 | 0.776 | 3.53 | -0.345 | 0.212 | -0.925 | -- | -- | 0.000882 | 9.56 | 10.8 | 1460 | -- | -- |
| 271.61 | 0.768 | 3.47 | -0.452 | -- | -0.66 | -- | 3.66 | 0.0315 | -- | 5.609 | 1428 | -- | -- |
| 282.15 | 0.787 | 3.53 | -0.595 | 0.174 | -- | 0.834 | -- | 0.0381 | 9.78 | -- | -- | -- | -- |
| 284.77 | 0.79 | 3.52 | -0.564 | 0.173 | -- | -- | -- | 0.039 | 9.28 | -- | -- | -- | -- |
| 280.37 | 0.78 | 3.54 | -0.361 | -- | -0.856 | -- | -- | 0.00575 | -- | 26.67 | 1460 | -- | -- |
| 280.32 | 0.78 | 3.52 | -- | 0.226 | -1.12 | -- | -- | 0.0396 | 9.62 | 12.45 | 1460 | -- | -- |
| 286.52 | 0.791 | 3.53 | -0.564 | -- | -- | -- | -- | 0.0398 | -- | -- | -- | -- | -- |
| 293.14 | 0.801 | 3.51 | -- | 0.174 | -- | -- | -- | 0.102 | 9.52 | -- | -- | -- | -- |
| 283.29 | 0.784 | 3.53 | -- | -- | -1.08 | -- | -- | 0.0308 | -- | 28.31 | 1451 | -- | -- |
| 294.92 | 0.802 | 3.52 | -- | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 261.13 | wind | 7 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 3 | 261.45 | wind | 7 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 4 | 261.58 | humidity | 90 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 8 | 261.99 | wind | 9 | 1440 | < th | dose dependent | rect. | 14 | 8 |
| 10 | 262.00 | wind | 1 | 1440 | > th | dose dependent | rect. | 14 | 8 |
| 20 | 262.26 | wind | 3 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 23 | 262.30 | humidity | 90 | 4320 | > th | dose independent | rect. | 24 | 4 |
| 30 | 262.32 | wind | 1 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 33 | 262.38 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 4 |
| 34 | 262.38 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 60 | 262.63 | humidity | 90 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 71 | 262.71 | wind | 5 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 102 | 262.91 | wind | 9 | 1440 | < th | dose dependent | sin | 18 | NA |
| 109 | 262.94 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 126 | 262.99 | wind | 1 | 1440 | > th | dose dependent | sin | 18 | NA |
| 138 | 263.05 | wind | 3 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 155 | 263.16 | wind | 3 | 1440 | < th | dose independent | sin | 17 | NA |
| 156 | 263.18 | wind | 3 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 161 | 263.20 | wind | 3 | 1440 | < th | dose independent | rect. | 13 | 13 |
| 167 | 263.23 | wind | 3 | 1440 | > th | dose independent | rect. | 11 | 15 |
| 186 | 263.30 | wind | 3 | 1440 | > th | dose independent | sin | 17 | NA |
| 225 | 263.46 | wind | 3 | 1440 | > th | dose independent | rect. | 14 | 8 |
| 240 | 263.50 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 242 | 263.50 | wind | 3 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 254 | 263.54 | wind | 3 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 298 | 263.69 | wind | 5 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 306 | 263.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 315 | 263.73 | wind | 7 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 356 | 263.87 | wind | 1 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 423 | 264.11 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 452 | 264.20 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 479 | 264.26 | humidity | 90 | 4320 | < th | dose independent | sin | 10 | NA |
| 562 | 264.47 | humidity | 50 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 565 | 264.48 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 588 | 264.54 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 710 | 264.85 | wind | 1 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 736 | 264.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 764 | 265.00 | humidity | 90 | 4320 | > th | dose independent | sin | 10 | NA |
| 887 | 265.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 933 | 265.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 987 | 265.45 | radiation | 20 | 14400 | < th | dose independent | rect. | 17 | 5 |