BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0515900 Os08g0515900|J080309P03
(56 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35420.1 | chr4:16834091-16835611 REVERSE LENGTH=327 83 3e-17
AT1G51410.1 | chr1:19059885-19061424 FORWARD LENGTH=326 60 2e-10
AT5G58490.1 | chr5:23643068-23644455 FORWARD LENGTH=325 59 4e-10
AT5G42800.1 | chr5:17164296-17165864 REVERSE LENGTH=383 59 5e-10
AT1G09490.1 | chr1:3064172-3065815 FORWARD LENGTH=323 58 1e-09
AT1G66800.1 | chr1:24924854-24926238 FORWARD LENGTH=320 57 1e-09
AT5G19440.1 | chr5:6556493-6558123 FORWARD LENGTH=327 57 2e-09
AT1G09480.1 | chr1:3057975-3060661 FORWARD LENGTH=370 57 2e-09
AT1G68540.1 | chr1:25720066-25721282 FORWARD LENGTH=322 57 2e-09
AT2G02400.1 | chr2:631413-632449 REVERSE LENGTH=319 57 3e-09
AT1G09510.1 | chr1:3069396-3070812 FORWARD LENGTH=323 56 4e-09
AT1G25460.1 | chr1:8942811-8944244 FORWARD LENGTH=321 54 2e-08
AT1G09500.1 | chr1:3066811-3068484 FORWARD LENGTH=326 54 2e-08
AT2G33600.1 | chr2:14226873-14228498 FORWARD LENGTH=322 52 5e-08
AT4G30470.1 | chr4:14894263-14896506 FORWARD LENGTH=304 50 3e-07
AT1G61720.1 | chr1:22791326-22792757 REVERSE LENGTH=341 50 3e-07
AT2G33590.1 | chr2:14224622-14226365 FORWARD LENGTH=322 50 3e-07
AT2G23910.1 | chr2:10177902-10179789 FORWARD LENGTH=305 49 4e-07
AT5G14700.1 | chr5:4740502-4743327 REVERSE LENGTH=369 46 4e-06
>AT4G35420.1 | chr4:16834091-16835611 REVERSE LENGTH=327
Length = 326
Score = 82.8 bits (203), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
+WYA++KTLAE+AAW+F++ENGIDLV VLP+F+VGP+L +L T +DVLGL +G
Sbjct: 160 VWYALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKG 214
>AT1G51410.1 | chr1:19059885-19061424 FORWARD LENGTH=326
Length = 325
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
+WY ++KTLAE AAW+FAKEN + LV++ P V+GP L L+ + VL L +G
Sbjct: 162 LWYVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKG 216
>AT5G58490.1 | chr5:23643068-23644455 FORWARD LENGTH=325
Length = 324
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQGT 56
+WY ++KTLAEKAAWEFA+E G+D+V V P V+GP + L+ + +L L QG
Sbjct: 161 LWYPLSKTLAEKAAWEFAEEKGLDVVVVNPGTVMGPVIPPSLNASMHMLLRLLQGC 216
>AT5G42800.1 | chr5:17164296-17165864 REVERSE LENGTH=383
Length = 382
Score = 58.9 bits (141), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 3 YAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVL 50
Y ++KTLAEKAAW+FA+E G+D ++++PT VVGP ++ + P+ L
Sbjct: 163 YFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITAL 210
>AT1G09490.1 | chr1:3064172-3065815 FORWARD LENGTH=323
Length = 322
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
WY+++K LAE AAW+FAK+NGID+V + P F+ GP L L+ + ++ G
Sbjct: 162 WYSLSKILAENAAWQFAKDNGIDMVVLNPGFICGPLLQPTLNMSVELIVDFING 215
>AT1G66800.1 | chr1:24924854-24926238 FORWARD LENGTH=320
Length = 319
Score = 57.4 bits (137), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
WY +KTLAE+ AW FAKENGIDLV + P V+GP L L+ + ++ L G
Sbjct: 158 WYGYSKTLAEETAWRFAKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLING 211
>AT5G19440.1 | chr5:6556493-6558123 FORWARD LENGTH=327
Length = 326
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
+WY ++KTLAE AAW+ AKE G+D+V + P V+GP L L+ + +L L G
Sbjct: 163 MWYVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING 217
>AT1G09480.1 | chr1:3057975-3060661 FORWARD LENGTH=370
Length = 369
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
WY ++K LAE AAWEFAK+NGID+V + P F+ GP L L+ + ++ G
Sbjct: 209 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFIFGPLLQPTLNFSVELIVDFING 262
>AT1G68540.1 | chr1:25720066-25721282 FORWARD LENGTH=322
Length = 321
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
+WY AKTL E+ AW A+E G+DLV V P+FVVGP L + + T +L + +G
Sbjct: 158 LWYGYAKTLGEREAWRIAEEKGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKG 212
>AT2G02400.1 | chr2:631413-632449 REVERSE LENGTH=319
Length = 318
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQGT 56
WY I+KTLAEKAAWEF++++G ++V + P+ +GP L L+ + +L L QG+
Sbjct: 157 WYPISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQPNLNASCAVLLQLLQGS 211
>AT1G09510.1 | chr1:3069396-3070812 FORWARD LENGTH=323
Length = 322
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
+WYA++KTLAE AW FAKE G+DLV + P V+GP L L+ + ++ L G
Sbjct: 161 LWYALSKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITG 215
>AT1G25460.1 | chr1:8942811-8944244 FORWARD LENGTH=321
Length = 320
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQGT 56
IWYA KTL EK AW A + ++LV V+P+F +GP LS + + + L + +GT
Sbjct: 157 IWYAYKKTLGEKEAWRIAADKKLNLVVVIPSFCIGPILSPKPTSSPLIFLSIIKGT 212
>AT1G09500.1 | chr1:3066811-3068484 FORWARD LENGTH=326
Length = 325
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTTTDVLGLFQG 55
WY ++KTLAE AAW FAK+N IDL+ + P V GP L L+ + ++ L +G
Sbjct: 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKG 216
>AT2G33600.1 | chr2:14226873-14228498 FORWARD LENGTH=322
Length = 321
Score = 52.4 bits (124), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSH 40
WY+++KT AE A+EFAK G+DLV+V PT V+GP L
Sbjct: 161 WYSLSKTRAESEAFEFAKRTGLDLVSVCPTLVLGPVLQQ 199
>AT4G30470.1 | chr4:14894263-14896506 FORWARD LENGTH=304
Length = 303
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLS-HELSPTTTDVLGLFQ 54
+W+A+AK L+EKAAW A + +++V++ P VVGP+++ H PT + + G Q
Sbjct: 158 LWHALAKMLSEKAAWALAMDRRLNMVSINPGLVVGPSVAQHNARPTMSYLKGAAQ 212
>AT1G61720.1 | chr1:22791326-22792757 REVERSE LENGTH=341
Length = 340
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 3 YAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVG 35
Y I+K LAEK AWEFAKEN I+LV V+P + G
Sbjct: 169 YPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201
>AT2G33590.1 | chr2:14224622-14226365 FORWARD LENGTH=322
Length = 321
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 2 WYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSH 40
WY +AKT AE A+EFAK G+ LV+V PT V+GP L
Sbjct: 161 WYCLAKTRAESEAFEFAKRTGLHLVSVCPTLVLGPILQQ 199
>AT2G23910.1 | chr2:10177902-10179789 FORWARD LENGTH=305
Length = 304
Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLS-HELSPTTTDVLGLFQ 54
+W+A+AKT +EKAAW A + +++V+V P +VGP+++ H PT + + G Q
Sbjct: 159 LWHALAKTQSEKAAWALAMDRMVNMVSVNPGLIVGPSVAQHNPRPTMSYLKGAAQ 213
>AT5G14700.1 | chr5:4740502-4743327 REVERSE LENGTH=369
Length = 368
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 IWYAIAKTLAEKAAWEFAKENGIDLVAVLPTFVVGPNLSHELSPTT 46
+WYA+ K AEKAAW A G+ L + P + GP+ + S +T
Sbjct: 214 LWYALGKLKAEKAAWRIADSKGLKLATICPALITGPDFFNRNSTST 259
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,217,333
Number of extensions: 35965
Number of successful extensions: 113
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 113
Number of HSP's successfully gapped: 21
Length of query: 56
Length of database: 11,106,569
Length adjustment: 29
Effective length of query: 27
Effective length of database: 10,311,505
Effective search space: 278410635
Effective search space used: 278410635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 104 (44.7 bits)