Os08g0485900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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Os08g0485900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.27 | 0.566 | 13.4 | -2.61 | 2.61 | -1.68 | 0.894 | 0.186 | -1.14 | 23.2 | 80.59 | 1579 | -- | -- |
| 145.29 | 0.561 | 13.4 | -2.59 | 2.61 | -1.67 | 0.908 | -- | -1.14 | 23.2 | 80.65 | 1578 | -- | -- |
| 148.55 | 0.568 | 13.4 | -2.66 | 2.61 | -1.7 | -- | 0.486 | -1.15 | 23.1 | 80.58 | 1574 | -- | -- |
| 148.72 | 0.568 | 13.4 | -2.63 | 2.6 | -1.67 | -- | -- | -1.14 | 23.1 | 80.71 | 1561 | -- | -- |
| 499.03 | 1.05 | 13.3 | -2.56 | -- | 0.771 | -- | 1.09 | -1.05 | -- | 80.58 | 1574 | -- | -- |
| 176.69 | 0.623 | 13.4 | -2.57 | 2.52 | -- | 0.935 | -- | -1.05 | 23 | -- | -- | -- | -- |
| 180.34 | 0.629 | 13.4 | -2.61 | 2.52 | -- | -- | -- | -1.05 | 22.9 | -- | -- | -- | -- |
| 351.07 | 0.873 | 13.2 | -2.36 | -- | -2.49 | -- | -- | -1.06 | -- | 85 | 859 | -- | -- |
| 312.53 | 0.823 | 13.3 | -- | 2.55 | -1.58 | -- | -- | -0.935 | 22.9 | 88 | 1504 | -- | -- |
| 575 | 1.12 | 13.3 | -2.55 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 359.71 | 0.887 | 13.3 | -- | 2.5 | -- | -- | -- | -0.762 | 22.9 | -- | -- | -- | -- |
| 478.33 | 1.02 | 13.3 | -- | -- | -2.84 | -- | -- | -1.13 | -- | 87.23 | 844 | -- | -- |
| 747.06 | 1.28 | 13.2 | -- | -- | -- | -- | -- | -0.752 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.35 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 2 | 144.36 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 3 | 144.37 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 12 | 144.87 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 17 | 144.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 20 | 144.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 38 | 145.25 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 60 | 145.45 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 15 |
| 91 | 145.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 113 | 145.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 179 | 146.21 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 180 | 146.21 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 205 | 146.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 246 | 146.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 251 | 146.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 312 | 146.87 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 375 | 147.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 398 | 147.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 454 | 147.46 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 473 | 147.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 476 | 147.52 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 478 | 147.52 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 479 | 147.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 489 | 147.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 490 | 147.54 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 9 |
| 506 | 147.60 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 513 | 147.63 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 544 | 147.74 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 551 | 147.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 562 | 147.78 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 584 | 147.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 585 | 147.85 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 587 | 147.86 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 598 | 147.90 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 611 | 147.94 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 613 | 147.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 627 | 147.98 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 629 | 147.98 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 649 | 148.05 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 701 | 148.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 733 | 148.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 736 | 148.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 742 | 148.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 788 | 148.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 815 | 148.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 14 |
| 816 | 148.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 823 | 148.50 | wind | 5.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 869 | 148.66 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 898 | 148.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 950 | 148.83 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 968 | 148.87 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 996 | 148.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |