Os08g0477500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os08g0477500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 415.78 | 0.958 | 8.84 | -0.704 | 6.22 | -4.26 | 4.19 | -0.374 | -0.353 | 7.32 | 92.65 | 655 | 13.4 | -- |
| 415.53 | 0.949 | 8.84 | -0.716 | 6.2 | -4.3 | 4.09 | -- | -0.349 | 7.33 | 92.7 | 645 | 13.6 | -- |
| 457.94 | 0.997 | 8.85 | -0.661 | 6.21 | -4.35 | -- | 0.836 | -0.36 | 7.33 | 92.86 | 627 | 13.6 | -- |
| 459.89 | 0.999 | 8.84 | -0.612 | 6.2 | -4.37 | -- | -- | -0.337 | 7.32 | 92.85 | 623 | 13.6 | -- |
| 569.25 | 1.11 | 8.92 | -0.717 | -- | -6.44 | -- | -4.16 | -0.0219 | -- | -106.3 | 67 | 11.3 | -- |
| 560.27 | 1.11 | 8.78 | -0.846 | 5.91 | -- | 3.92 | -- | -0.0518 | 7.5 | -- | -- | -- | -- |
| 602.76 | 1.15 | 8.78 | -0.755 | 5.92 | -- | -- | -- | -0.059 | 7.48 | -- | -- | -- | -- |
| 534.73 | 1.08 | 8.94 | -0.743 | -- | -7.14 | -- | -- | -0.0687 | -- | -252.9 | 1800 | 13.6 | -- |
| 469.66 | 1.01 | 8.82 | -- | 6.19 | -4.43 | -- | -- | -0.273 | 7.33 | 92.89 | 622 | 13.6 | -- |
| 2475.34 | 2.32 | 8.92 | -0.664 | -- | -- | -- | -- | 0.0348 | -- | -- | -- | -- | -- |
| 617.78 | 1.16 | 8.76 | -- | 5.91 | -- | -- | -- | 0.0251 | 7.49 | -- | -- | -- | -- |
| 551.29 | 1.09 | 8.93 | -- | -- | -7.22 | -- | -- | -0.00666 | -- | -226.7 | 1796 | 13.5 | -- |
| 2486.97 | 2.33 | 8.9 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 410.61 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 10 | 417.84 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 37 | 428.83 | humidity | 90.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 50 | 434.54 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 65 | 436.76 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 75 | 437.38 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 85 | 439.71 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 141 | 445.08 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 161 | 446.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 194 | 448.97 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 196 | 449.20 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 199 | 449.40 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 204 | 449.51 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 250 | 451.57 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 270 | 452.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 285 | 453.23 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 333 | 454.72 | humidity | 70.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 345 | 455.30 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 364 | 455.81 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 371 | 455.91 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 376 | 456.06 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 383 | 456.13 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 420 | 456.81 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 428 | 457.00 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 443 | 457.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 451 | 457.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 457 | 457.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 466 | 458.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 475 | 458.11 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 478 | 458.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 479 | 458.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 491 | 458.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 496 | 458.33 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 498 | 458.34 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 503 | 458.40 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 507 | 458.48 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 511 | 458.52 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 556 | 458.97 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 570 | 459.20 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 574 | 459.25 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 582 | 459.38 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 585 | 459.41 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 594 | 459.61 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 625 | 460.02 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 662 | 460.54 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 674 | 460.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 752 | 461.16 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 0 | NA |
| 760 | 461.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 820 | 461.80 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 855 | 461.93 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 863 | 462.03 | humidity | 90.0 | 720 | > th | dose independent | sin | 19 | NA |
| 866 | 462.04 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 869 | 462.05 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 885 | 462.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 928 | 462.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 929 | 462.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 944 | 462.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 946 | 462.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 951 | 462.69 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 19 |