Os08g0474600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os08g0474600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.4 | 0.241 | 10.7 | -0.818 | 0.363 | 0.826 | -0.0323 | -0.352 | 0.0396 | 4.33 | 21.7 | 1527 | -- | -- |
| 26.7 | 0.241 | 10.6 | -0.68 | 0.363 | 0.787 | -0.0399 | -- | 0.057 | 4.25 | 22 | 1518 | -- | -- |
| 26.4 | 0.239 | 10.7 | -0.818 | 0.363 | 0.825 | -- | -0.354 | 0.0398 | 4.34 | 21.7 | 1526 | -- | -- |
| 26.68 | 0.241 | 10.6 | -0.663 | 0.37 | 0.788 | -- | -- | 0.0634 | 4.28 | 22.01 | 1518 | -- | -- |
| 32.56 | 0.266 | 10.7 | -0.784 | -- | 0.803 | -- | -0.414 | 0.0379 | -- | 22 | 1331 | -- | -- |
| 48.96 | 0.328 | 10.6 | -0.369 | 0.379 | -- | -0.101 | -- | 0.318 | 4.23 | -- | -- | -- | -- |
| 48.99 | 0.328 | 10.6 | -0.368 | 0.379 | -- | -- | -- | 0.319 | 4.27 | -- | -- | -- | -- |
| 32.97 | 0.267 | 10.6 | -0.654 | -- | 0.815 | -- | -- | 0.0645 | -- | 22.1 | 1353 | -- | -- |
| 36.9 | 0.283 | 10.6 | -- | 0.365 | 0.614 | -- | -- | 0.163 | 4.43 | 22.3 | 1437 | -- | -- |
| 56.74 | 0.352 | 10.6 | -0.352 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 52.55 | 0.339 | 10.6 | -- | 0.372 | -- | -- | -- | 0.36 | 4.28 | -- | -- | -- | -- |
| 42.55 | 0.304 | 10.6 | -- | -- | 0.633 | -- | -- | 0.173 | -- | 22.37 | 1282 | -- | -- |
| 60.02 | 0.362 | 10.6 | -- | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 8 | 26.44 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 14 | 26.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 33 | 26.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 80 | 26.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 167 | 26.91 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 184 | 26.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 194 | 27.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 195 | 27.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 225 | 27.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 282 | 27.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 284 | 27.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 332 | 27.55 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 336 | 27.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 376 | 27.63 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 419 | 27.71 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 432 | 27.73 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 433 | 27.73 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 501 | 27.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 509 | 27.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 511 | 27.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 520 | 27.90 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 535 | 27.92 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 542 | 27.93 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 550 | 27.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 551 | 27.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 552 | 27.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 593 | 28.01 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 704 | 28.17 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 828 | 28.42 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 903 | 28.53 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 929 | 28.57 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 969 | 28.62 | humidity | 60 | 43200 | < th | dose dependent | sin | 7 | NA |