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Os08g0469500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.9 (0.0375) R2 : 0.679
β1 : -1.83 (0.138) R2dD : 0.134 R2D : 0.00747
β2 : 2.3 (0.094) R2dC : 0.458 R2C : 0.311
β3 : -0.966 (0.0939) R2dE : 0.0831 R2E : -0.0918
β4 : -2.29 (0.355) R2dD*C : 0.0307 R2D*C : -0.0394
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.14 (0.0802) R2dN8 : 0.19 R2N8 : 0.0704
σ : 0.7
deviance : 225.74
__
_____
C
peak time of C : 22
E
wheather : humidity
threshold : 72.73
memory length : 82
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
218.92 0.695 6.9 -1.76 2.31 -0.876 -1.75 -1.6 -1.1 21.9 70.08 88 -- --
225.74 0.7 6.9 -1.83 2.3 -0.966 -2.29 -- -1.14 22 72.73 82 -- --
228.33 0.704 6.9 -1.67 2.34 -0.846 -- -2.3 -1.1 21.8 69.89 62 -- --
246.53 0.731 6.9 -1.75 2.33 -0.934 -- -- -1.13 21.9 74.46 65 -- --
350.22 0.872 6.87 -1.85 -- -2.57 -- 1.69 -1.29 -- 74.42 679 -- --
252.83 0.745 6.88 -1.86 2.25 -- -2.23 -- -1.03 20.8 -- -- -- --
268.93 0.768 6.88 -1.78 2.27 -- -- -- -1.03 20.7 -- -- -- --
355.2 0.878 6.87 -1.66 -- -2.54 -- -- -1.28 -- 76.62 660 -- --
324.01 0.838 6.87 -- 2.24 -1.02 -- -- -0.995 21.8 81 88 -- --
560.37 1.11 6.82 -1.79 -- -- -- -- -1.05 -- -- -- -- --
352.71 0.879 6.83 -- 2.28 -- -- -- -0.831 20.6 -- -- -- --
423.45 0.958 6.85 -- -- -2.68 -- -- -1.2 -- 81.89 634 -- --
644.77 1.19 6.77 -- -- -- -- -- -0.85 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 208.52 temperature 30.0 720 < th dose dependent rect. 24 7
3 209.69 temperature 30.0 270 < th dose dependent rect. 7 4
17 210.53 humidity 90.0 270 < th dose independent rect. 1 16
38 211.79 radiation 40.0 90 < th dose independent rect. 12 23
44 212.12 humidity 90.0 90 < th dose independent rect. 7 12
48 212.21 temperature 15.0 270 > th dose dependent rect. 1 7
52 212.34 temperature 10.0 720 > th dose dependent rect. 21 9
61 212.71 humidity 80.0 90 > th dose independent rect. 3 7
80 213.33 radiation 40.0 270 < th dose independent rect. 10 21
88 213.59 radiation 40.0 10 < th dose independent rect. 12 23
102 214.03 atmosphere 995.0 270 > th dose independent rect. 10 23
103 214.04 temperature 30.0 90 < th dose independent rect. 12 21
121 214.40 temperature 25.0 720 < th dose dependent sin 6 NA
126 214.47 humidity 60.0 90 > th dose dependent sin 4 NA
133 214.57 humidity 80.0 90 > th dose independent rect. 1 9
136 214.60 humidity 90.0 90 < th dose independent sin 0 NA
138 214.65 humidity 80.0 270 > th dose independent rect. 1 7
161 215.00 humidity 60.0 90 > th dose independent rect. 12 21
173 215.17 humidity 70.0 90 > th dose dependent rect. 3 7
176 215.24 radiation 40.0 90 < th dose independent rect. 1 10
184 215.40 radiation 10.0 270 < th dose independent rect. 1 8
191 215.55 wind 9.0 720 < th dose dependent rect. 24 6
202 215.68 atmosphere 1000.0 90 > th dose independent rect. 12 21
208 215.74 temperature 25.0 270 < th dose independent rect. 7 4
210 215.74 humidity 60.0 90 > th dose dependent rect. 1 9
212 215.75 atmosphere 995.0 270 > th dose independent rect. 12 19
213 215.75 temperature 15.0 270 > th dose dependent rect. 3 3
247 216.06 humidity 60.0 90 > th dose independent rect. 12 23
280 216.29 radiation 40.0 90 < th dose dependent rect. 12 21
281 216.30 precipitation 0.1 90 < th dose independent rect. 9 16
283 216.30 precipitation 0.1 90 < th dose dependent rect. 9 16
288 216.35 radiation 1.0 720 > th dose independent rect. 7 2
305 216.48 radiation 40.0 90 < th dose dependent rect. 12 23
311 216.54 radiation 30.0 270 < th dose dependent rect. 1 7
312 216.54 temperature 10.0 720 > th dose dependent rect. 18 15
313 216.55 radiation 40.0 10 < th dose independent rect. 1 10
331 216.69 radiation 40.0 10 < th dose dependent rect. 13 22
351 216.84 humidity 70.0 10 > th dose independent rect. 2 8
360 216.91 wind 1.0 90 > th dose independent rect. 9 4
367 216.96 precipitation 0.1 270 < th dose independent rect. 7 18
368 216.96 precipitation 0.1 270 < th dose dependent rect. 7 18
387 217.10 humidity 70.0 270 > th dose dependent rect. 1 7
389 217.10 humidity 70.0 90 > th dose dependent rect. 19 20
396 217.15 temperature 15.0 720 > th dose independent rect. 21 22
400 217.19 humidity 50.0 90 > th dose dependent rect. 12 21
405 217.21 humidity 70.0 90 > th dose dependent rect. 19 17
408 217.25 wind 1.0 270 > th dose independent rect. 6 6
420 217.29 humidity 50.0 30 > th dose dependent rect. 12 23
424 217.32 humidity 70.0 90 > th dose dependent rect. 19 22
443 217.40 temperature 10.0 30 > th dose dependent rect. 8 12
454 217.45 humidity 50.0 10 > th dose dependent rect. 2 9
455 217.45 humidity 70.0 90 > th dose dependent rect. 9 23
461 217.48 humidity 70.0 270 > th dose dependent rect. 1 13
490 217.59 temperature 20.0 270 > th dose independent rect. 1 7
495 217.61 radiation 30.0 90 < th dose independent rect. 3 6
501 217.64 atmosphere 1000.0 270 > th dose independent rect. 8 14
502 217.65 radiation 10.0 270 < th dose independent rect. 1 12
522 217.72 temperature 30.0 90 < th dose independent rect. 1 8
540 217.79 wind 9.0 90 < th dose independent rect. 1 8
541 217.79 temperature 10.0 90 > th dose independent rect. 1 8
544 217.79 atmosphere 995.0 90 > th dose independent rect. 1 8
545 217.79 atmosphere 1015.0 90 < th dose independent rect. 1 8
546 217.79 temperature 10.0 90 > th dose independent rect. 9 16
562 217.86 precipitation 0.1 90 < th dose independent rect. 1 8
563 217.86 precipitation 0.1 90 < th dose dependent rect. 1 8
571 217.90 atmosphere 995.0 90 > th dose dependent rect. 9 3
577 217.92 humidity 70.0 90 > th dose dependent rect. 17 22
579 217.94 atmosphere 995.0 720 > th dose independent rect. 24 16
590 217.97 temperature 20.0 720 < th dose independent rect. 1 8
599 218.01 temperature 10.0 90 > th dose independent rect. 9 3
600 218.01 atmosphere 995.0 90 > th dose independent rect. 9 3
601 218.01 atmosphere 1015.0 90 < th dose independent rect. 9 3
604 218.01 temperature 10.0 90 > th dose independent rect. 12 21
606 218.02 temperature 15.0 10 > th dose dependent rect. 3 6
613 218.04 temperature 20.0 720 < th dose independent rect. 24 10
616 218.05 wind 3.0 270 < th dose dependent rect. 3 3
617 218.06 temperature 30.0 10 < th dose independent rect. 11 1
643 218.15 radiation 1.0 90 > th dose independent rect. 9 3
644 218.15 precipitation 0.1 90 < th dose independent rect. 9 3
650 218.15 temperature 10.0 720 > th dose dependent sin 11 NA
651 218.15 precipitation 0.1 90 < th dose dependent rect. 9 3
656 218.18 temperature 10.0 270 > th dose independent rect. 7 5
657 218.18 atmosphere 995.0 270 > th dose independent rect. 7 5
658 218.18 atmosphere 1015.0 270 < th dose independent rect. 7 5
662 218.19 atmosphere 995.0 270 > th dose dependent rect. 9 1
681 218.29 precipitation 0.1 90 < th dose independent rect. 9 18
684 218.29 precipitation 0.1 90 < th dose dependent rect. 9 18
704 218.34 wind 9.0 90 < th dose independent rect. 12 21
707 218.35 radiation 40.0 90 < th dose dependent rect. 3 7
712 218.37 radiation 1.0 90 > th dose dependent sin 2 NA
713 218.37 temperature 10.0 270 > th dose dependent rect. 6 11
715 218.39 precipitation 0.1 270 < th dose independent rect. 7 5
717 218.39 precipitation 0.1 270 < th dose dependent rect. 7 5
720 218.39 humidity 70.0 90 > th dose dependent rect. 24 23
736 218.47 temperature 20.0 720 < th dose independent rect. 5 2
754 218.54 temperature 15.0 720 > th dose independent rect. 21 14
772 218.59 temperature 20.0 720 < th dose independent rect. 3 4
776 218.59 humidity 70.0 90 > th dose dependent rect. 15 23
777 218.60 humidity 50.0 270 > th dose independent rect. 7 5
784 218.61 wind 9.0 270 < th dose independent rect. 1 6
785 218.61 temperature 10.0 270 > th dose independent rect. 1 6
787 218.61 temperature 30.0 270 < th dose independent rect. 1 6
788 218.61 humidity 50.0 270 > th dose independent rect. 1 6
790 218.61 atmosphere 995.0 270 > th dose independent rect. 1 6
791 218.61 atmosphere 1010.0 270 < th dose independent rect. 1 6
794 218.61 atmosphere 995.0 720 > th dose independent rect. 9 8
795 218.61 temperature 10.0 270 > th dose independent rect. 7 18
801 218.63 radiation 10.0 270 < th dose independent sin 5 NA
802 218.63 precipitation 0.1 270 < th dose independent rect. 1 6
805 218.63 precipitation 0.1 270 < th dose dependent rect. 1 6
874 218.82 temperature 30.0 270 < th dose independent rect. 2 10
885 218.83 radiation 1.0 90 > th dose dependent rect. 13 23
892 218.85 radiation 1.0 270 > th dose dependent sin 7 NA
909 218.89 radiation 1.0 90 > th dose dependent rect. 15 22
915 218.91 wind 9.0 270 < th dose independent rect. 10 23
925 218.94 humidity 70.0 90 > th dose dependent no NA NA
930 218.95 humidity 80.0 90 > th dose independent sin 5 NA
944 218.97 radiation 1.0 90 > th dose dependent rect. 7 6
948 218.98 temperature 10.0 720 > th dose dependent rect. 20 1
963 218.99 wind 1.0 30 > th dose independent rect. 1 10
965 218.99 temperature 30.0 30 < th dose independent rect. 12 23
978 219.03 wind 3.0 90 < th dose independent rect. 3 6
986 219.03 radiation 10.0 270 < th dose dependent rect. 1 13
990 219.04 radiation 1.0 90 > th dose dependent rect. 7 12