Os08g0462900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF716 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0462900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF716 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 485.55 | 1.04 | 9.6 | -3.14 | 3.32 | -0.763 | 0.527 | -20.5 | 0.235 | 6.59 | 25.44 | 4200 | 9.37 | 1.02 |
| 669.19 | 1.2 | 9.06 | 1.12 | 3.28 | -2.4 | -0.724 | -- | 1.33 | 6.45 | 26.14 | 1469 | 8.77 | 0.886 |
| 485.14 | 1.03 | 9.61 | -3.02 | 3.35 | -0.735 | -- | -20.6 | 0.261 | 6.55 | 25.58 | 4198 | 9.44 | 0.917 |
| 580.11 | 1.12 | 8.95 | 1.43 | 3.43 | -2.95 | -- | -- | 1.21 | 6.63 | 25.74 | 4314 | 9.12 | 1.25 |
| 1019.51 | 1.49 | 9.64 | -2.87 | -- | -1.76 | -- | -20 | 0.348 | -- | 24.7 | 3860 | 9.49 | 1.6 |
| 904.11 | 1.41 | 8.99 | 0.833 | 3.26 | -- | 0.445 | -- | 1.2 | 6.82 | -- | -- | -- | -- |
| 904.62 | 1.41 | 8.99 | 0.841 | 3.26 | -- | -- | -- | 1.2 | 6.82 | -- | -- | -- | -- |
| 751.48 | 1.28 | 8.77 | 1.76 | -- | -5.19 | -- | -- | 2.12 | -- | 15.85 | 2354 | 12.5 | 0.0834 |
| 651.91 | 1.19 | 8.94 | -- | 3.37 | -2.79 | -- | -- | 1.23 | 6.65 | 26 | 4286 | 9.75 | 1.38 |
| 1460.51 | 1.79 | 9.06 | 0.912 | -- | -- | -- | -- | 1.27 | -- | -- | -- | -- | -- |
| 923.25 | 1.42 | 9.01 | -- | 3.27 | -- | -- | -- | 1.11 | 6.81 | -- | -- | -- | -- |
| 825.75 | 1.34 | 8.96 | -- | -- | -4.53 | -- | -- | 1.66 | -- | 12.41 | 2231 | 12.7 | 0.217 |
| 1482.47 | 1.8 | 9.08 | -- | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 428.35 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 2 | 432.40 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 5 | 432.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 13 |
| 8 | 432.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 11 | 432.56 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 15 | 432.59 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 29 | 432.92 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 32 | 434.84 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 62 | 439.25 | temperature | 30 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 98 | 442.41 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 117 | 444.31 | temperature | 30 | 14400 | > th | dose dependent | sin | 8 | NA |
| 133 | 444.75 | temperature | 30 | 14400 | < th | dose independent | sin | 8 | NA |
| 134 | 444.98 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 156 | 446.18 | temperature | 30 | 14400 | > th | dose independent | sin | 8 | NA |
| 157 | 446.23 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 209 | 449.98 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 454 | 461.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 455 | 461.85 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 562 | 462.19 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 608 | 464.75 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 652 | 465.72 | radiation | 40 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 711 | 467.24 | radiation | 1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 727 | 467.73 | radiation | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 732 | 468.38 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 733 | 468.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 760 | 469.19 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 868 | 469.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 872 | 469.38 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 873 | 469.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 883 | 469.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 889 | 469.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 890 | 469.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 891 | 469.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 15 |
| 940 | 469.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 998 | 469.75 | radiation | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |