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Os08g0457600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RSH2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0215) R2 : 0.645
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.58 (0.055) R2dC : 0.649 R2C : 0.644
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0516 (0.0452) R2dN8 : 0.00131 R2N8 : -0.00403
σ : 0.405
deviance : 74.99
__
_____
C
peak time of C : 7.89
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.5 0.34 13.2 1.02 1.59 -0.658 0.333 1.06 0.218 7.91 20.3 1659 -- --
54.95 0.345 13.2 0.943 1.59 -0.893 0.16 -- 0.213 7.84 20.3 1658 -- --
52.83 0.339 13.2 1.03 1.58 -0.666 -- 1.06 0.218 7.91 20.25 1659 -- --
54.82 0.345 13.2 0.894 1.58 -0.881 -- -- 0.209 7.87 19.9 1618 -- --
180.26 0.625 13.2 1.39 -- -0.883 -- 2.08 0.445 -- 25.2 2093 -- --
67.54 0.385 13.2 0.499 1.58 -- 0.443 -- 0.0057 7.91 -- -- -- --
68.12 0.387 13.2 0.511 1.58 -- -- -- 0.00523 7.91 -- -- -- --
184.49 0.633 13.2 0.795 -- -0.81 -- -- 0.284 -- 25.2 2083 -- --
66.72 0.383 13.2 -- 1.6 -0.459 -- -- 0.0137 8.13 19.9 1618 -- --
203.72 0.667 13.3 0.528 -- -- -- -- 0.0263 -- -- -- -- --
74.99 0.405 13.3 -- 1.58 -- -- -- -0.0516 7.89 -- -- -- --
156.8 0.583 13.2 -- -- -0.974 -- -- 0.227 -- 25.9 517 -- --
211.07 0.678 13.3 -- -- -- -- -- -0.0323 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.54 temperature 20 270 > th dose independent rect. 16 10
2 51.00 temperature 20 270 > th dose independent rect. 17 17
8 51.60 temperature 20 90 > th dose independent sin 10 NA
15 51.89 temperature 20 90 > th dose independent rect. 5 23
21 52.07 temperature 20 10 > th dose independent sin 9 NA
36 52.48 temperature 20 10 > th dose independent rect. 19 9
44 52.62 temperature 20 1440 > th dose independent rect. 6 1
48 52.68 temperature 20 1440 > th dose independent rect. 17 11
50 52.68 temperature 20 1440 > th dose independent rect. 14 17
56 52.72 temperature 20 1440 > th dose independent sin 12 NA
58 52.72 temperature 20 1440 > th dose independent rect. 15 13
59 52.72 temperature 20 1440 < th dose independent rect. 15 16
62 52.73 temperature 20 1440 < th dose independent rect. 17 11
63 52.73 temperature 20 1440 > th dose independent rect. 17 15
77 52.76 temperature 20 1440 < th dose independent sin 12 NA
84 52.78 temperature 20 1440 < th dose independent rect. 15 13
86 52.78 temperature 20 1440 < th dose independent rect. 17 14
92 52.80 temperature 20 4320 < th dose independent rect. 20 1
134 52.94 temperature 20 1440 < th dose independent rect. 23 11
144 52.95 temperature 20 1440 > th dose independent rect. 22 13
151 52.96 temperature 20 1440 > th dose independent rect. 23 11
182 53.02 temperature 20 1440 < th dose independent rect. 24 8
185 53.02 temperature 20 1440 > th dose independent rect. 22 17
228 53.07 temperature 20 1440 < th dose independent rect. 22 18
258 53.10 temperature 20 90 < th dose independent rect. 11 20
259 53.11 temperature 20 4320 > th dose independent rect. 20 1
324 53.19 temperature 20 90 < th dose independent rect. 11 22
347 53.23 temperature 20 1440 < th dose independent rect. 6 1
368 53.26 temperature 20 90 < th dose independent sin 11 NA
389 53.28 temperature 20 90 < th dose independent rect. 11 18
399 53.30 temperature 20 4320 > th dose independent rect. 19 3
409 53.31 temperature 20 1440 > th dose independent rect. 1 2
511 53.43 temperature 20 1440 > th dose independent rect. 5 23
546 53.48 temperature 20 1440 > th dose independent no NA NA
570 53.53 temperature 20 1440 < th dose independent rect. 5 23
573 53.54 temperature 20 90 < th dose independent rect. 15 20
574 53.54 temperature 20 90 < th dose independent rect. 9 22
578 53.56 temperature 20 1440 < th dose independent no NA NA
585 53.57 temperature 20 10 < th dose independent sin 10 NA
594 53.59 temperature 20 10 > th dose independent rect. 19 17
603 53.60 temperature 15 270 > th dose dependent rect. 18 15
626 53.65 temperature 20 90 < th dose independent rect. 17 18
628 53.65 temperature 20 90 < th dose independent rect. 18 23
660 53.71 humidity 90 14400 > th dose dependent rect. 6 1
716 53.79 temperature 20 90 < th dose independent rect. 15 14
717 53.79 temperature 20 90 < th dose independent rect. 15 16
727 53.81 temperature 20 90 > th dose independent no NA NA
729 53.81 temperature 20 90 < th dose independent rect. 5 23
733 53.82 temperature 20 10 > th dose independent rect. 6 22
740 53.84 temperature 20 90 < th dose independent no NA NA
748 53.85 temperature 20 90 < th dose independent rect. 17 12
755 53.87 temperature 20 90 < th dose independent rect. 17 14
804 53.93 temperature 20 90 < th dose independent rect. 21 23
904 54.11 humidity 50 14400 > th dose dependent rect. 5 1
951 54.17 temperature 20 10 < th dose independent rect. 15 15
972 54.20 temperature 20 10 < th dose independent rect. 18 12