BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0457600 Os08g0457600|AK065020
(718 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54130.1 | chr1:20211177-20213761 FORWARD LENGTH=716 780 0.0
AT3G14050.1 | chr3:4650902-4653514 REVERSE LENGTH=710 777 0.0
AT4G02260.1 | chr4:985451-991178 FORWARD LENGTH=885 209 5e-54
AT3G17470.1 | chr3:5979868-5981968 FORWARD LENGTH=584 137 1e-32
>AT1G54130.1 | chr1:20211177-20213761 FORWARD LENGTH=716
Length = 715
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/561 (67%), Positives = 446/561 (79%), Gaps = 17/561 (3%)
Query: 146 RLFSSFVRNALGSCVDYXXXXXXXXXXXXXXXXXXXXXXFELDEHLSEAEPSCEPYARDL 205
RLF+ FVR A+GSCVDY F +D+ E E +PYARDL
Sbjct: 152 RLFNGFVRKAIGSCVDYDTDSVLVDEQLP----------FTMDDGF-EGERR-QPYARDL 199
Query: 206 LAGAQARHRIFHDELVVKAFFEAERAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVS 265
L AQ +H+IF DE V+KAF+EAE+AHRGQ RA+GDPYLQHCVETA+LLA IGAN+TVV
Sbjct: 200 LRRAQLKHKIFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVV 259
Query: 266 AGLLHDTIDDSFMDYDQIFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHT 325
AG+LHDT+DDSFM YD I R FG+GVADLVEGVSKLS LSKLAR+NNTA +TVEADRLHT
Sbjct: 260 AGILHDTLDDSFMSYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHT 319
Query: 326 MFLAMADARAVLIKLADRLHNMKTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQL 385
MFLAMADARAVLIKLADRLHNM T+ ALP VK+QRFAKET+EIF PLANRLGI+SWK +L
Sbjct: 320 MFLAMADARAVLIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKL 379
Query: 386 ENICFKHLNPEEHKELSSKLVISFDEALLTSTLDKLDKGLRDEGISYHSLSGRHKSLYSI 445
EN+CFKHL+P++H E+S L SFDEA++TS ++KL++ L+ EGISYH +SGRHKSLYSI
Sbjct: 380 ENLCFKHLHPDQHHEMSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSI 439
Query: 446 YSKMIKKNLTMDDVHDIHGLRLVVDTEQDCYQALDIVHKLWPRVAGRFKDYILHPKLNGY 505
Y KM+KK LTMD++HDIHGLRL+VD E+DCY+AL +VHKLW V G+ KDYI HPK NGY
Sbjct: 440 YCKMLKKKLTMDEIHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGY 499
Query: 506 RSLHTVIMCEGIHPFEVQIRTKEMHLQAEYGFAAHWRYKEGGCKH-SFVLQMVEWARWVL 564
+SLHTV+M +G P EVQIRTKEMHLQAE+GFAAHWRYKEG CKH SFVLQMVEWARWV+
Sbjct: 500 QSLHTVVMGDGTIPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVV 559
Query: 565 TWQCEAMSKERSSGLGRSDAIRPPCPFPSHSEDCPYSYTRQCNHDGPIFVIMLEHDKMSV 624
TW E MSK+ SS P C FPSH+EDCP+SY N +GP++VI++E++KM+V
Sbjct: 560 TWHFETMSKDGSSICSS----EPLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTV 615
Query: 625 QELPANSTVVDLMERVGANSPRCSPYSFPLKEELRPRVNHKPISDPNRKLCMGDVVELTP 684
QE P NSTV DL+ R G S R S YS P KEELRPR+N P+SD KL MGDVVELTP
Sbjct: 616 QEFPENSTVSDLLRRAGPGSSRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTP 675
Query: 685 ALPHKSLTEYREEIQRMYERG 705
A+P KSLTEYREEIQRMY+RG
Sbjct: 676 AIPDKSLTEYREEIQRMYDRG 696
>AT3G14050.1 | chr3:4650902-4653514 REVERSE LENGTH=710
Length = 709
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/681 (61%), Positives = 491/681 (72%), Gaps = 38/681 (5%)
Query: 49 HQAIAGGLSCLFSSPTXXXXXXXXQ------DELGALWHDRSGEATAVXXXXXXXXYSYP 102
+ I GGLS LFSS + DE +L +DRS + + YS
Sbjct: 46 QKPIVGGLSSLFSSASVKSSSSSSCSYSTGVDEFSSLRYDRSDDLKDLSFSSSFG-YSPA 104
Query: 103 QPSSPFKWRDMLHHSPVPLFHXXXXXXXX---XXXXXXWLAGRER---ERLFSSFVRNAL 156
+ + F+ RD H SP+ + H L G R LF+ FVR AL
Sbjct: 105 KFVNSFR-RD--HQSPISVLHGPVSCSCSPPMRMSRDRNLDGSFRLGASGLFNGFVRKAL 161
Query: 157 GSCVDYXXXXXXXXXXXXXXXXXXXXXXFELDEHLSEAE-PSCEPYARDLLAGAQARHRI 215
GSCVDY +DE E + +PYARDLL AQ RH+I
Sbjct: 162 GSCVDYEFGSDSVL----------------VDELTFPMEVDTIKPYARDLLRRAQLRHKI 205
Query: 216 FHDELVVKAFFEAERAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDD 275
F+DE V+KAF+EAE+AHRGQ RAS DPYLQHCVETA+LLA IGAN+TVV AGLLHDTIDD
Sbjct: 206 FNDESVIKAFYEAEKAHRGQMRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDD 265
Query: 276 SFMDYDQIFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARA 335
SFM YD I R FGAGVADLVEGVSKLS LSKLAR+NNTA +TVEADRLHTMFLAMADARA
Sbjct: 266 SFMSYDYILRNFGAGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARA 325
Query: 336 VLIKLADRLHNMKTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENICFKHLNP 395
VLIKLADRLHNMKT+ AL VKQQRFAKET+EIF PLANRLGI++WK QLEN+CFKHL P
Sbjct: 326 VLIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYP 385
Query: 396 EEHKELSSKLVISFDEALLTSTLDKLDKGLRDEGISYHSLSGRHKSLYSIYSKMIKKNLT 455
+H E+S+ L SFDEA++TS ++KL++ L+ GISYH L GRHKSLYSIYSKM+KK LT
Sbjct: 386 NQHNEMSTMLEDSFDEAMITSAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLT 445
Query: 456 MDDVHDIHGLRLVVDTEQDCYQALDIVHKLWPRVAGRFKDYILHPKLNGYRSLHTVIMCE 515
+D++HDIHGLRL+VD E DCY+AL +VH LW V G+ KDYI HPK NGY+SLHTV+M
Sbjct: 446 VDEIHDIHGLRLIVDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDN 505
Query: 516 GIHPFEVQIRTKEMHLQAEYGFAAHWRYKEGGCKH-SFVLQMVEWARWVLTWQCEAMSKE 574
G P EVQIRT+EMHLQAE+GFAAHWRYKEGGCK+ SFVLQMVEWARWV+TW CEAMSK+
Sbjct: 506 GTVPLEVQIRTQEMHLQAEFGFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKD 565
Query: 575 RSSGLGRSDAIRPPCPFPSHSEDCPYSYTRQCNHDGPIFVIMLEHDKMSVQELPANSTVV 634
RSS + SD+I+PPC FPSHSEDCP SY + DGP++VI++E+DKMSVQE PA+STV
Sbjct: 566 RSS-ISSSDSIKPPCKFPSHSEDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVS 624
Query: 635 DLMERVGANSPRCSPYSFPLKEELRPRVNHKPISDPNRKLCMGDVVELTPALPHKSLTEY 694
DL+ R G S R S Y P KEELRPR+N P+SD KL MGDVVELTP +P +SLTEY
Sbjct: 625 DLLSRAGPGSSRWSMYGIPAKEELRPRLNQIPVSDLKWKLKMGDVVELTPTIPDESLTEY 684
Query: 695 REEIQRMYERGGFALATTRDG 715
REEIQRMY+RG LA +R G
Sbjct: 685 REEIQRMYDRG---LAFSRPG 702
>AT4G02260.1 | chr4:985451-991178 FORWARD LENGTH=885
Length = 884
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 201/352 (57%), Gaps = 26/352 (7%)
Query: 219 ELVVKAFFEAERAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDS-F 277
E V K A AH GQ R SG+P++ H V A +L ++ + + AGLLHDT++D+ F
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNF 207
Query: 278 MDYDQIFRMFGAGVADLVEGVSKLSHLSKL-ARDNNTASRTVEADRLHTMFLAMAD-ARA 335
+ +++I FGA V +VEG +K+S L KL + + + V+AD L MFLAM D R
Sbjct: 208 ITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRV 267
Query: 336 VLIKLADRLHNMKTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENICFKHLNP 395
+++KLADRLHNM+T+ +P KQ A ET+++F PLA LG+ S K +LEN+ F +++
Sbjct: 268 IIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSA 327
Query: 396 EEHKELSSKLVISFD--EALLTSTLDKLDKGLRDEG----ISYHS-LSGRHKSLYSIYSK 448
E++ ++S++ + E LT L K + D+ ++ ++ + K YSIY
Sbjct: 328 EDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKA 387
Query: 449 MIKKNLTMDDVHDI-HGLRLVV------------DTEQDCYQALDIVHKLWPRVAGRFKD 495
+K +++D + I LR+VV +Q CY L +VH++W + KD
Sbjct: 388 ALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKD 447
Query: 496 YILHPKLNGYRSLHTVI---MCEGIHPFEVQIRTKEMHLQAEYGFAAHWRYK 544
YI PK NGY+SLHT + + E + EVQIRT+EM L AE G A ++ K
Sbjct: 448 YIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGK 499
>AT3G17470.1 | chr3:5979868-5981968 FORWARD LENGTH=584
Length = 583
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 169/335 (50%), Gaps = 35/335 (10%)
Query: 238 ASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFMDYDQIFRMFGAGVADLVEG 297
+ G L + +++LA + +A V+SA +L + +D + + ++ G G A L+
Sbjct: 107 SDGRSPLSKALSLSIILADLQMDAEVISASILSEVVDANAISIYEVRDHIGTGTAHLLHE 166
Query: 298 VSKLSHL--SKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRLHNMKTIEALPL 355
+ ++ ++ D+ TA+ L +L D RAV++ L +L M+ ++ LP
Sbjct: 167 IFRVKNIPFKVDVLDDETAAS------LRKFYLTYYDIRAVIMDLVSKLDEMRHLDHLPR 220
Query: 356 VKQQRFAKETMEIFVPLANRLGIASWKDQLENICFKHLNP----------EEHKELSSKL 405
+QQ + E ++I+ PLA+ +G +LE+I F++L P H+ S L
Sbjct: 221 YRQQILSLEVLKIYSPLAHAVGANHLSLELEDISFRYLFPCSYIYLDSWLRGHENGSKPL 280
Query: 406 VISFDEALLTSTLDKLDKGLRDEGISYHSLSGRHKSLYSIYSKMIKKNLTMDDVHDIHGL 465
+ + E L S D L + E ++ + GR+KS YS+ K+++ ++V+D+ GL
Sbjct: 281 IDVYKEQLHRSLKDDL---VLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGL 337
Query: 466 RLVV-------DT---EQDCYQALDIVHKLWPRVAGRFKDYILHPKLNGYRSLHTVIMC- 514
R+++ D E+ CY+ +I+ LW + R KDYI PK NGYRSLH +
Sbjct: 338 RVILMPNSVVNDVEVGEKACYRTSEIIRSLWKEIPHRTKDYIARPKENGYRSLHMAVDVS 397
Query: 515 --EGIHPF-EVQIRTKEMHLQAEYGFAAHWRYKEG 546
+ I P E+QIRT +M A G A+H YK G
Sbjct: 398 DSDQIRPLMEIQIRTMDMDGSANAGTASHSLYKGG 432
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,117,106
Number of extensions: 551147
Number of successful extensions: 1227
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1213
Number of HSP's successfully gapped: 4
Length of query: 718
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 612
Effective length of database: 8,200,473
Effective search space: 5018689476
Effective search space used: 5018689476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)