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Os08g0451400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : AT-rich interaction region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0166) R2 : 0.16
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.325 (0.0349) R2dN8 : 0.207 R2N8 : 0.16
σ : 0.312
deviance : 44.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.66 0.197 10.2 -0.297 0.625 0.154 0.0883 0.591 0.296 8.52 68.29 108 -- --
18.8 0.202 10.2 -0.27 0.611 0.167 -0.0177 -- 0.299 8.5 67.3 154 -- --
17.68 0.196 10.2 -0.289 0.621 0.153 -- 0.589 0.296 8.5 67 112 -- --
18.79 0.202 10.2 -0.269 0.609 0.178 -- -- 0.302 8.56 68.42 158 -- --
27.16 0.243 10.2 -0.275 -- 0.691 -- 0.297 0.34 -- 67 605 -- --
19.46 0.207 10.2 -0.268 0.659 -- 0.0933 -- 0.287 7.75 -- -- -- --
19.48 0.207 10.2 -0.265 0.659 -- -- -- 0.287 7.78 -- -- -- --
27.28 0.243 10.2 -0.263 -- 0.702 -- -- 0.344 -- 67 595 -- --
20.7 0.212 10.2 -- 0.613 0.177 -- -- 0.331 8.58 66.37 143 -- --
42.97 0.306 10.2 -0.257 -- -- -- -- 0.297 -- -- -- -- --
21.34 0.216 10.2 -- 0.657 -- -- -- 0.317 7.8 -- -- -- --
29.07 0.251 10.2 -- -- 0.71 -- -- 0.37 -- 65.92 604 -- --
44.72 0.312 10.2 -- -- -- -- -- 0.325 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.12 temperature 15.0 10 > th dose dependent rect. 20 12
4 16.26 temperature 10.0 720 > th dose dependent rect. 19 3
10 16.43 temperature 10.0 720 > th dose dependent rect. 20 1
19 16.56 temperature 20.0 90 > th dose dependent rect. 4 3
50 16.82 temperature 20.0 90 > th dose independent rect. 4 3
55 16.83 wind 1.0 720 > th dose independent rect. 19 3
71 16.90 temperature 20.0 10 > th dose independent rect. 20 12
73 16.91 precipitation 0.1 720 < th dose independent rect. 7 10
74 16.91 precipitation 0.1 720 < th dose dependent rect. 7 10
88 16.99 radiation 1.0 720 > th dose independent rect. 7 3
91 17.00 precipitation 0.1 30 < th dose independent rect. 8 20
94 17.00 humidity 50.0 30 > th dose dependent rect. 17 15
95 17.00 precipitation 0.1 30 < th dose dependent rect. 8 20
103 17.02 wind 9.0 720 < th dose independent rect. 17 14
108 17.02 radiation 10.0 720 < th dose dependent rect. 19 12
114 17.05 wind 3.0 30 < th dose independent rect. 4 4
120 17.06 wind 1.0 720 > th dose independent rect. 7 12
121 17.06 precipitation 0.1 270 < th dose independent rect. 5 22
126 17.06 precipitation 0.1 270 < th dose dependent rect. 5 22
135 17.08 radiation 20.0 270 < th dose dependent rect. 15 16
137 17.09 wind 7.0 720 < th dose independent rect. 19 3
140 17.09 radiation 1.0 30 < th dose independent rect. 5 23
148 17.10 atmosphere 995.0 720 > th dose independent rect. 16 1
156 17.11 radiation 10.0 270 < th dose independent rect. 15 16
165 17.11 radiation 1.0 30 < th dose dependent rect. 5 23
168 17.12 radiation 10.0 270 < th dose independent rect. 14 18
170 17.12 wind 7.0 720 < th dose independent rect. 10 21
173 17.12 humidity 50.0 90 > th dose dependent rect. 19 13
177 17.13 wind 3.0 270 < th dose independent rect. 4 1
179 17.13 temperature 20.0 720 > th dose independent rect. 19 2
181 17.13 wind 9.0 720 < th dose independent rect. 19 10
182 17.13 atmosphere 995.0 270 > th dose independent rect. 6 11
183 17.13 precipitation 0.1 270 < th dose independent rect. 15 11
187 17.13 precipitation 0.1 270 < th dose dependent rect. 15 11
189 17.14 radiation 1.0 270 > th dose independent rect. 6 11
195 17.15 atmosphere 1010.0 720 < th dose independent rect. 19 2
198 17.15 temperature 10.0 720 > th dose independent rect. 7 10
199 17.15 atmosphere 1015.0 720 < th dose independent rect. 7 10
201 17.15 temperature 10.0 720 > th dose independent rect. 17 14
202 17.15 radiation 40.0 720 < th dose independent rect. 17 14
203 17.15 atmosphere 1000.0 30 > th dose dependent rect. 4 4
212 17.16 wind 7.0 720 < th dose independent rect. 19 12
223 17.17 temperature 10.0 30 > th dose independent rect. 4 4
225 17.17 temperature 30.0 30 < th dose independent rect. 4 4
226 17.17 humidity 50.0 30 > th dose independent rect. 4 4
228 17.17 atmosphere 995.0 30 > th dose independent rect. 4 4
229 17.17 atmosphere 1015.0 30 < th dose independent rect. 4 4
230 17.17 precipitation 0.1 30 < th dose independent rect. 4 4
232 17.17 wind 9.0 30 < th dose independent rect. 8 20
233 17.17 temperature 10.0 30 > th dose independent rect. 8 20
235 17.17 precipitation 0.1 30 < th dose dependent rect. 4 4
249 17.19 humidity 50.0 14400 > th dose independent rect. 5 4
250 17.19 temperature 10.0 720 > th dose independent rect. 19 10
251 17.19 temperature 30.0 720 < th dose independent rect. 19 10
252 17.19 humidity 50.0 720 > th dose independent rect. 19 10
254 17.19 atmosphere 995.0 720 > th dose independent rect. 19 10
255 17.19 radiation 20.0 720 < th dose independent rect. 19 10
258 17.19 temperature 10.0 720 > th dose independent rect. 5 14
259 17.19 atmosphere 1015.0 720 < th dose independent rect. 5 14
265 17.19 radiation 40.0 720 < th dose dependent rect. 19 10
269 17.19 radiation 20.0 270 < th dose dependent rect. 17 14
275 17.20 wind 9.0 1440 < th dose independent rect. 5 4
276 17.20 temperature 10.0 1440 > th dose independent rect. 5 4
279 17.20 humidity 50.0 1440 > th dose independent rect. 5 4
281 17.20 atmosphere 995.0 1440 > th dose independent rect. 5 4
282 17.20 atmosphere 1015.0 1440 < th dose independent rect. 5 4
283 17.20 radiation 40.0 30 < th dose independent rect. 4 4
285 17.20 temperature 20.0 270 > th dose independent rect. 17 14
286 17.20 temperature 10.0 1440 > th dose independent rect. 9 20
289 17.20 wind 9.0 30 < th dose dependent rect. 4 4
294 17.20 radiation 20.0 720 < th dose dependent rect. 19 10
301 17.21 radiation 1.0 270 > th dose independent sin 1 NA
303 17.21 temperature 25.0 10 > th dose independent rect. 1 7
304 17.21 radiation 1.0 720 < th dose independent rect. 19 10
310 17.21 atmosphere 995.0 30 > th dose independent rect. 8 20
312 17.21 radiation 1.0 270 < th dose independent rect. 1 22
320 17.22 humidity 60.0 720 > th dose independent rect. 19 12
322 17.22 atmosphere 995.0 720 > th dose independent rect. 16 17
330 17.23 radiation 20.0 30 < th dose independent rect. 4 4
348 17.23 radiation 10.0 270 < th dose dependent rect. 1 22
350 17.24 precipitation 0.1 720 < th dose independent rect. 16 1
353 17.24 temperature 10.0 720 > th dose independent rect. 19 12
354 17.24 temperature 30.0 720 < th dose independent rect. 19 12
356 17.24 atmosphere 995.0 720 > th dose independent rect. 19 12
358 17.24 radiation 40.0 720 < th dose independent rect. 19 12
359 17.24 humidity 50.0 270 > th dose independent rect. 17 13
360 17.24 humidity 70.0 90 > th dose independent rect. 19 13
361 17.24 radiation 20.0 90 < th dose independent rect. 19 13
362 17.24 precipitation 0.1 720 < th dose independent rect. 5 14
364 17.24 wind 1.0 270 > th dose independent rect. 6 21
366 17.24 precipitation 0.1 720 < th dose dependent rect. 16 1
369 17.24 radiation 30.0 720 < th dose dependent rect. 2 5
374 17.24 precipitation 0.1 720 < th dose dependent rect. 5 14
379 17.25 precipitation 0.1 720 < th dose independent rect. 7 3
387 17.25 atmosphere 995.0 270 > th dose independent rect. 15 11
394 17.25 precipitation 0.1 720 < th dose dependent rect. 7 3
397 17.25 temperature 30.0 270 < th dose dependent rect. 21 6
407 17.26 humidity 60.0 720 > th dose independent rect. 19 3
419 17.26 atmosphere 995.0 30 > th dose independent rect. 16 12
427 17.26 wind 9.0 90 < th dose dependent rect. 17 15
431 17.26 radiation 10.0 720 < th dose dependent rect. 19 21
435 17.27 temperature 15.0 720 > th dose independent rect. 7 3
436 17.27 temperature 10.0 720 > th dose independent rect. 19 3
437 17.27 temperature 30.0 720 < th dose independent rect. 19 3
438 17.27 humidity 50.0 720 > th dose independent rect. 7 3
440 17.27 atmosphere 995.0 720 > th dose independent rect. 19 3
441 17.27 radiation 1.0 720 < th dose independent rect. 19 3
448 17.27 atmosphere 1005.0 30 > th dose independent rect. 4 4
449 17.27 wind 7.0 720 < th dose independent rect. 11 11
455 17.27 temperature 10.0 720 > th dose independent rect. 22 21
456 17.27 radiation 1.0 720 < th dose dependent rect. 19 3
480 17.28 wind 9.0 720 < th dose independent rect. 7 3
482 17.28 atmosphere 995.0 720 > th dose independent rect. 7 3
483 17.28 atmosphere 1015.0 720 < th dose independent rect. 7 3
505 17.28 radiation 30.0 30 < th dose dependent rect. 16 12
522 17.29 wind 1.0 720 > th dose independent rect. 14 5
526 17.29 humidity 90.0 720 < th dose independent rect. 7 10
529 17.29 wind 9.0 270 < th dose independent rect. 6 11
532 17.29 atmosphere 1010.0 90 < th dose independent rect. 19 13
533 17.29 radiation 1.0 720 < th dose independent rect. 19 13
539 17.29 wind 9.0 90 < th dose dependent rect. 19 13
546 17.30 wind 7.0 720 < th dose independent rect. 2 5
551 17.30 temperature 30.0 30 < th dose independent rect. 18 10
573 17.30 temperature 30.0 10 < th dose independent rect. 4 12
576 17.30 precipitation 0.1 30 < th dose independent rect. 16 12
592 17.30 precipitation 0.1 30 < th dose dependent rect. 16 12
607 17.31 temperature 15.0 90 > th dose independent rect. 8 11
614 17.31 precipitation 0.1 720 < th dose independent rect. 22 21
616 17.31 wind 9.0 720 < th dose dependent rect. 4 1
623 17.31 radiation 1.0 720 < th dose dependent rect. 19 17
625 17.31 precipitation 0.1 720 < th dose dependent rect. 22 21
626 17.32 wind 1.0 720 > th dose independent rect. 16 1
629 17.32 precipitation 0.1 720 < th dose independent rect. 21 7
630 17.32 temperature 10.0 1440 > th dose independent rect. 9 9
637 17.32 wind 7.0 720 < th dose independent rect. 10 13
648 17.32 precipitation 0.1 720 < th dose independent rect. 23 18
651 17.32 precipitation 0.1 720 < th dose dependent rect. 21 7
659 17.32 precipitation 0.1 720 < th dose dependent rect. 23 18
660 17.32 radiation 40.0 270 < th dose dependent rect. 11 20
662 17.33 temperature 10.0 720 > th dose independent rect. 16 1
663 17.33 atmosphere 1015.0 720 < th dose independent rect. 16 1
664 17.33 radiation 40.0 720 < th dose independent rect. 16 1
672 17.33 temperature 10.0 720 > th dose independent rect. 21 7
673 17.33 temperature 30.0 720 < th dose independent rect. 21 7
674 17.33 humidity 50.0 720 > th dose independent rect. 21 7
677 17.33 atmosphere 995.0 720 > th dose independent rect. 21 7
678 17.33 radiation 1.0 720 < th dose independent rect. 21 7
684 17.33 temperature 10.0 1440 > th dose independent rect. 9 11
690 17.33 wind 7.0 90 < th dose independent rect. 19 13
701 17.33 temperature 10.0 720 > th dose independent rect. 4 17
702 17.33 wind 9.0 720 < th dose independent rect. 19 19
705 17.33 temperature 10.0 720 > th dose independent rect. 17 23
710 17.33 radiation 1.0 720 < th dose dependent rect. 21 7
726 17.34 temperature 10.0 720 > th dose independent rect. 4 1
728 17.34 temperature 30.0 720 < th dose independent rect. 4 1
729 17.34 humidity 50.0 720 > th dose independent rect. 4 1
732 17.34 atmosphere 995.0 720 > th dose independent rect. 4 1
733 17.34 atmosphere 1015.0 720 < th dose independent rect. 4 1
734 17.34 radiation 20.0 720 < th dose independent rect. 4 1
748 17.34 atmosphere 1015.0 90 < th dose independent rect. 8 11
751 17.34 temperature 10.0 90 > th dose independent rect. 19 13
753 17.34 temperature 30.0 90 < th dose independent rect. 19 13
755 17.34 humidity 50.0 90 > th dose independent rect. 19 13
757 17.34 atmosphere 995.0 90 > th dose independent rect. 19 13
762 17.34 temperature 10.0 720 > th dose independent rect. 5 23
765 17.34 radiation 40.0 720 < th dose dependent rect. 4 1
767 17.34 wind 9.0 720 < th dose dependent rect. 2 5
783 17.35 wind 1.0 720 > th dose independent rect. 7 3
790 17.35 humidity 90.0 90 < th dose independent rect. 8 11
792 17.35 atmosphere 1015.0 10 < th dose independent rect. 20 12
795 17.35 precipitation 0.1 10 < th dose independent rect. 8 12
798 17.35 radiation 40.0 90 < th dose independent rect. 19 13
812 17.35 radiation 20.0 720 < th dose dependent rect. 4 1
817 17.35 precipitation 0.1 10 < th dose dependent rect. 8 12
823 17.35 radiation 1.0 270 < th dose dependent rect. 3 15
830 17.36 wind 1.0 720 > th dose independent rect. 8 1
831 17.36 radiation 1.0 720 < th dose independent rect. 4 1
836 17.36 atmosphere 995.0 720 > th dose independent rect. 15 4
844 17.36 wind 9.0 90 < th dose independent rect. 8 11
846 17.36 radiation 1.0 30 < th dose independent rect. 15 13
851 17.36 humidity 50.0 30 > th dose independent rect. 17 15
853 17.36 temperature 30.0 270 < th dose dependent rect. 23 2
855 17.36 radiation 40.0 90 < th dose dependent rect. 4 4
857 17.36 radiation 20.0 270 < th dose dependent rect. 2 7
866 17.36 humidity 70.0 90 > th dose dependent rect. 15 20
870 17.37 precipitation 0.1 270 < th dose independent rect. 4 1
875 17.37 radiation 10.0 270 < th dose independent rect. 2 6
876 17.37 temperature 10.0 30 > th dose independent rect. 4 12
878 17.37 temperature 10.0 30 > th dose independent rect. 16 12
879 17.37 atmosphere 995.0 30 > th dose independent rect. 4 12
880 17.37 atmosphere 1015.0 30 < th dose independent rect. 4 12
881 17.37 radiation 20.0 30 < th dose independent rect. 16 12
884 17.37 precipitation 0.1 30 < th dose independent rect. 4 12
889 17.37 atmosphere 995.0 720 > th dose independent rect. 5 23
891 17.37 precipitation 0.1 270 < th dose dependent rect. 4 1
896 17.37 humidity 50.0 30 > th dose dependent rect. 4 4
903 17.37 precipitation 0.1 30 < th dose dependent rect. 4 12
955 17.38 precipitation 0.1 720 < th dose independent rect. 23 10
959 17.38 radiation 40.0 270 < th dose independent rect. 15 11
960 17.38 radiation 1.0 30 < th dose independent rect. 17 11
962 17.38 wind 9.0 30 < th dose independent rect. 16 12
971 17.38 atmosphere 1010.0 270 < th dose independent rect. 17 14
974 17.38 humidity 80.0 90 > th dose independent rect. 16 16
1000 17.38 precipitation 0.1 720 < th dose dependent rect. 23 10