BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0451400 Os08g0451400|AK066110
         (761 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G43240.1  | chr3:15210032-15214440 REVERSE LENGTH=748          785   0.0  

>AT3G43240.1 | chr3:15210032-15214440 REVERSE LENGTH=748
          Length = 747

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/755 (52%), Positives = 495/755 (65%), Gaps = 33/755 (4%)

Query: 1   MAQIQSSSLVNCTLLAVLCG-KVTDKQQKPPGLVPEVKRPRLSYPFPELISSGRLEVHTL 59
           M   Q  S   C ++AV+ G ++ D   +  G   + K     YPFP+L SSGRL+   L
Sbjct: 1   MFHGQGFSRNRCNVVAVVSGAELCDTNNQIDGTSHQPK-----YPFPDLSSSGRLKFQVL 55

Query: 60  INPTVDQFRKAQQAVQPNLMYLQGQQLENEEEIGTLVWGDADVSDPQIFSSLISPPFPTI 119
            NPT ++F+ A  +   + +YLQG+   + +E+G LV G  D S P    +L     PT 
Sbjct: 56  NNPTPEEFQVAVNSSATDFVYLQGEHSGDSDEVGPLVLGYTDFSTPDALVTLFGSTLPTT 115

Query: 120 VYLEVPAGEKLAQSLQLKGIPYVLYWRNSFSSYAASHFRQALISVVQSSCSHTWDAFQLA 179
           VYLE+P GE+LAQ+L  KG+ YV+YW+N FS YAA HFR +L SV+QSSCS TWD F +A
Sbjct: 116 VYLELPNGEELAQALYSKGVQYVIYWKNVFSKYAACHFRHSLFSVIQSSCSDTWDVFHVA 175

Query: 180 QASFRLYC--------ARNNDAQSVKLGPRLLGDAPKINIFLPXXXXXXXXXXXXHFPAI 231
           +ASFRLYC        + +N   + ++GP LLG+ PKI++  P              P+I
Sbjct: 176 EASFRLYCTSDNAVLPSNSNRKMNYEMGPCLLGEPPKIDVVSPEADELEEENSLESLPSI 235

Query: 232 KIYDEDVNMKLLICGAPCILDASLLGSLEDGLNALLNIEIRGCRLQNRVSAAPPPLHAET 291
           KIYDEDV ++ L+CG PC +D  LLGSL DGLNALL IE+RG +L NR SA  PPL A T
Sbjct: 236 KIYDEDVTVRFLLCGPPCTVDTFLLGSLMDGLNALLRIEMRGSKLHNRSSAPAPPLQAGT 295

Query: 292 LPHGVVTMRCDITTCXXXXXXXXXXXXPQTCFDDKLLENHIKKEIVEKGQLVRAVLVRED 351
              GVVTMRCD++TC             QTCF D+LLENHIK E+VEK QLV +V+  E+
Sbjct: 296 FTRGVVTMRCDVSTCSSAHISMLVSGNAQTCFSDQLLENHIKHEVVEKIQLVHSVVNSEE 355

Query: 352 DKPSSVEPLTSISVASGASTFEVWMTLPKWAGQVLKYLAPEISYKSLVPLGIACVNGTPV 411
            K    EP  S S+A GAS  EV M +P WA QVL+ LAP++SY+SLV LG+A + G  V
Sbjct: 356 TKRGFSEPRRSASIACGASVCEVSMQVPTWALQVLRQLAPDVSYRSLVVLGVASIQGLSV 415

Query: 412 SSFDRQDVDRLLFFC----KNEAIVNGLYSHLPRWSASLVKDRLKGTPESKSSTFSANGV 467
           +SF++ D +RLLFFC     + +  + L S +P W    +  R +  P  +S      G 
Sbjct: 416 ASFEKDDAERLLFFCGQQINDTSNHDALLSKIPNWLTPPLPTRKRSEPCRESKEIENGGP 475

Query: 468 GEYQKHPMKGTSLVVKPKLKSAKMRPIPHSSKRQMHPFVGIPPSFIHDASQVKPSLPAPP 527
                            K+  A +RPIPH+ + +M PF G       D    K SLP PP
Sbjct: 476 --------------TSRKINVAALRPIPHTRRHKMIPFSGYSEIGRFDGDHTKGSLPMPP 521

Query: 528 VRHNALPVAPTTQRKLSSGTSRVEPAVPLNPLPMKKHGCDRLPIGICSEEDFLKDVMQFL 587
            +H A    P T RK  SG+ + +  + LNPLP+KKH C R  I +CSEE+FL+DVMQFL
Sbjct: 522 -KHGASGGTPVTHRKAFSGSYQRKQIISLNPLPLKKHDCGRAHIQVCSEEEFLRDVMQFL 580

Query: 588 LQRGHTRLVPQGGLAEFPDAVLNAKRLDLYNLYKEVVSRGGFYVGNGINWKGQVFSKMSN 647
           L RGHTRLVP GGLAEFPDAVLN+KRLDL+NLY+EVVSRGGF+VGNGINWKGQVFSKM N
Sbjct: 581 LIRGHTRLVPPGGLAEFPDAVLNSKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRN 640

Query: 648 HTVTNKMTGVGNTLKRHYETYLLEYELSHDDVGGECCLLCHSSAPGDWVNCGLCGEWAHF 707
           HT+TN+MTGVGNTLKRHYETYLLEYE +HDDV GECCL+C SS  GDWVNCG CGEWAHF
Sbjct: 641 HTLTNRMTGVGNTLKRHYETYLLEYEYAHDDVDGECCLICRSSTAGDWVNCGSCGEWAHF 700

Query: 708 GCDRRQGLGTFKDYAKTDGLEYICPHCSLANYKKK 742
           GCDRR GLG FKDYAKTDGLEY+CP+CS++NY+KK
Sbjct: 701 GCDRRPGLGAFKDYAKTDGLEYVCPNCSVSNYRKK 735



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,351,064
Number of extensions: 770302
Number of successful extensions: 2057
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2055
Number of HSP's successfully gapped: 1
Length of query: 761
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 655
Effective length of database: 8,200,473
Effective search space: 5371309815
Effective search space used: 5371309815
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)