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Os08g0446800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.032) R2 : 0.75
β1 : -0.801 (0.118) R2dD : 0.0266 R2D : 0.00772
β2 : 4 (0.121) R2dC : 1.37 R2C : 0.401
β3 : 2.16 (0.14) R2dE : 0.301 R2E : -0.671
β4 : 2.86 (0.338) R2dD*C : 0.0398 R2D*C : 0.0213
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.175 (0.0686) R2dN8 : 0.00497 R2N8 : -0.0152
σ : 0.596
deviance : 164.02
__
_____
C
peak time of C : 8.39
E
wheather : temperature
threshold : 10.94
memory length : 69
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.9
open length of G : 7.42

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
163.68 0.601 11.3 -0.81 4 2.14 2.47 -0.706 -0.185 8.39 10.34 69 18 7.39
164.02 0.596 11.3 -0.801 4 2.16 2.86 -- -0.175 8.39 10.94 69 17.9 7.42
172.43 0.612 11.4 -0.805 3.92 2 -- -2.92 -0.206 8.37 8.84 52 18.1 7.38
188.59 0.64 11.4 -0.693 3.92 1.95 -- -- -0.186 8.34 8.919 52 18.1 7.37
290.82 0.794 11.5 -1.04 -- 3.32 -- -1.47 -0.24 -- -0.7407 1103 17.6 7.62
234.73 0.718 11.4 -0.682 2.7 -- 2.53 -- -0.0536 7.68 -- -- -- --
252.65 0.744 11.4 -0.621 2.71 -- -- -- -0.0586 7.59 -- -- -- --
239.03 0.72 11.5 -1.05 -- 3.29 -- -- -0.467 -- -5.679 988 17.6 12.5
200.98 0.66 11.3 -- 3.94 1.95 -- -- -0.107 8.39 7.851 50 18.2 7.32
645.99 1.19 11.4 -0.582 -- -- -- -- -0.0174 -- -- -- -- --
262.81 0.758 11.3 -- 2.7 -- -- -- 0.0106 7.6 -- -- -- --
253.52 0.742 11.5 -- -- 2.99 -- -- -0.177 -- -30.19 1019 17.1 12.7
654.94 1.19 11.4 -- -- -- -- -- 0.0472 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.85 temperature 10.0 90 > th dose dependent rect. 18 7
5 168.47 temperature 10.0 270 > th dose dependent rect. 16 8
27 176.76 temperature 30.0 10 < th dose dependent rect. 13 5
37 178.92 radiation 20.0 43200 < th dose dependent rect. 19 7
44 179.60 radiation 20.0 10 < th dose dependent rect. 23 19
49 180.55 temperature 10.0 30 > th dose dependent rect. 18 20
54 181.06 temperature 10.0 270 > th dose dependent rect. 17 18
58 181.90 atmosphere 1010.0 30 < th dose independent rect. 18 7
63 182.17 radiation 40.0 30 < th dose dependent rect. 12 6
80 183.23 atmosphere 995.0 270 > th dose independent rect. 16 7
87 183.73 temperature 10.0 270 > th dose dependent rect. 16 20
88 183.75 temperature 20.0 30 > th dose independent rect. 18 7
90 183.90 humidity 50.0 30 > th dose independent rect. 14 4
91 183.93 wind 5.0 270 < th dose independent rect. 17 5
92 184.02 humidity 50.0 10 > th dose dependent rect. 14 4
106 184.51 temperature 15.0 90 > th dose independent rect. 1 17
108 184.57 wind 1.0 90 > th dose independent rect. 18 7
109 184.61 radiation 20.0 10 < th dose dependent rect. 1 17
114 184.89 wind 1.0 270 > th dose independent rect. 11 6
119 184.99 wind 7.0 270 < th dose independent rect. 16 7
120 185.01 atmosphere 995.0 270 > th dose independent rect. 15 22
136 185.50 wind 1.0 90 > th dose independent rect. 13 5
141 185.63 atmosphere 995.0 270 > th dose independent rect. 17 18
142 185.72 temperature 30.0 90 < th dose dependent rect. 15 2
145 185.77 atmosphere 1015.0 270 < th dose independent rect. 16 7
147 185.80 humidity 50.0 270 > th dose independent rect. 12 5
150 185.88 humidity 50.0 90 > th dose independent rect. 18 19
153 186.02 radiation 10.0 90 < th dose independent rect. 18 7
154 186.03 atmosphere 995.0 90 > th dose independent rect. 18 7
156 186.06 precipitation 0.1 10 < th dose independent rect. 18 20
157 186.06 precipitation 0.1 10 < th dose dependent rect. 18 20
161 186.13 humidity 50.0 90 > th dose independent rect. 18 7
166 186.13 atmosphere 1015.0 90 < th dose independent rect. 1 17
169 186.18 wind 9.0 90 < th dose independent rect. 18 7
174 186.24 radiation 10.0 30 < th dose dependent rect. 18 7
176 186.26 radiation 40.0 90 < th dose dependent rect. 18 7
178 186.30 wind 9.0 90 < th dose independent rect. 1 17
189 186.44 wind 1.0 270 > th dose independent rect. 13 2
199 186.47 radiation 30.0 270 < th dose independent rect. 16 7
202 186.48 temperature 15.0 270 > th dose independent rect. 16 7
203 186.50 wind 5.0 30 < th dose independent rect. 18 7
205 186.51 wind 9.0 270 < th dose independent rect. 23 17
213 186.67 temperature 15.0 270 > th dose independent rect. 23 17
216 186.70 humidity 50.0 14400 > th dose independent rect. 19 7
220 186.75 wind 1.0 270 > th dose independent rect. 16 7
221 186.77 precipitation 0.1 10 < th dose independent rect. 18 7
222 186.77 precipitation 0.1 10 < th dose dependent rect. 18 7
235 187.02 radiation 1.0 1440 < th dose dependent rect. 19 7
236 187.03 temperature 15.0 30 > th dose independent rect. 18 20
237 187.09 temperature 15.0 270 > th dose independent rect. 11 6
243 187.15 atmosphere 1015.0 30 < th dose independent rect. 18 20
245 187.24 humidity 50.0 270 > th dose independent rect. 23 18
250 187.30 atmosphere 995.0 30 > th dose independent rect. 18 20
265 187.46 temperature 10.0 30 > th dose independent rect. 14 4
267 187.46 atmosphere 1010.0 30 < th dose independent rect. 14 4
269 187.46 radiation 20.0 30 < th dose independent rect. 12 6
275 187.52 radiation 40.0 30 < th dose independent rect. 14 4
292 187.71 wind 9.0 270 < th dose independent rect. 17 18
296 187.75 atmosphere 1015.0 270 < th dose independent rect. 11 6
319 187.96 precipitation 0.1 270 < th dose independent rect. 16 7
320 187.96 precipitation 0.1 270 < th dose dependent rect. 16 7
322 188.01 wind 9.0 270 < th dose independent rect. 11 6
323 188.01 temperature 25.0 10 < th dose independent rect. 12 6
326 188.09 wind 9.0 30 < th dose independent rect. 14 4
327 188.09 wind 9.0 30 < th dose independent rect. 18 20
328 188.10 precipitation 0.1 270 < th dose independent rect. 11 6
331 188.10 precipitation 0.1 270 < th dose dependent rect. 11 6
335 188.11 precipitation 0.1 270 < th dose independent rect. 17 18
336 188.11 precipitation 0.1 270 < th dose dependent rect. 17 18
354 188.25 radiation 1.0 270 < th dose independent rect. 21 21
370 188.31 precipitation 0.1 270 < th dose independent rect. 23 17
371 188.31 precipitation 0.1 270 < th dose dependent rect. 23 17
378 188.41 wind 1.0 90 > th dose dependent rect. 13 5
379 188.42 precipitation 0.1 30 < th dose independent rect. 14 4
380 188.42 precipitation 0.1 30 < th dose dependent rect. 14 4
383 188.43 radiation 10.0 10 < th dose independent rect. 23 19
390 188.47 wind 5.0 270 < th dose independent rect. 18 3
400 188.56 temperature 25.0 90 < th dose independent rect. 13 6
405 188.60 temperature 10.0 270 > th dose independent rect. 13 2
407 188.60 atmosphere 1010.0 270 < th dose independent rect. 13 2
409 188.60 temperature 10.0 270 > th dose independent rect. 15 22
411 188.61 wind 9.0 270 < th dose independent rect. 13 2
414 188.65 temperature 10.0 1440 > th dose independent rect. 19 7
417 188.65 temperature 30.0 1440 < th dose independent rect. 19 7
421 188.65 humidity 50.0 1440 > th dose independent rect. 19 7
423 188.65 atmosphere 995.0 1440 > th dose independent rect. 19 7
424 188.65 radiation 1.0 1440 < th dose independent rect. 19 7
444 188.65 temperature 10.0 1440 > th dose independent rect. 2 17
460 188.80 precipitation 0.1 30 < th dose independent rect. 1 17
461 188.80 precipitation 0.1 30 < th dose dependent rect. 1 17
475 188.93 temperature 30.0 10 < th dose independent rect. 18 7
499 189.07 wind 9.0 270 < th dose independent rect. 15 22
502 189.10 wind 9.0 270 < th dose dependent rect. 17 5
525 189.22 humidity 50.0 270 > th dose independent rect. 3 9
529 189.25 precipitation 0.1 270 < th dose independent rect. 13 2
530 189.25 precipitation 0.1 270 < th dose dependent rect. 13 2
576 189.75 temperature 10.0 1440 > th dose independent rect. 15 4
580 189.75 temperature 10.0 1440 > th dose independent rect. 19 20
587 189.79 atmosphere 1015.0 270 < th dose independent rect. 23 17
605 189.96 precipitation 0.1 270 < th dose independent rect. 3 9
608 189.96 precipitation 0.1 270 < th dose dependent rect. 3 9
617 190.03 atmosphere 1005.0 270 > th dose dependent rect. 13 2
646 190.22 wind 9.0 270 < th dose independent rect. 16 20
692 190.58 wind 1.0 90 > th dose independent rect. 1 17
700 190.64 precipitation 0.1 270 < th dose independent rect. 15 22
702 190.64 precipitation 0.1 270 < th dose dependent rect. 15 22
703 190.65 temperature 10.0 270 > th dose independent rect. 3 9
704 190.65 atmosphere 995.0 270 > th dose independent rect. 3 9
705 190.65 atmosphere 1015.0 270 < th dose independent rect. 3 9
706 190.65 temperature 10.0 270 > th dose independent rect. 12 15
720 190.74 precipitation 0.1 270 < th dose independent rect. 16 20
721 190.74 precipitation 0.1 270 < th dose dependent rect. 16 20
731 190.81 atmosphere 1005.0 270 > th dose dependent rect. 12 4
744 190.94 atmosphere 1000.0 30 > th dose dependent rect. 13 5
773 191.20 wind 9.0 270 < th dose independent rect. 3 9
790 191.24 atmosphere 995.0 1440 > th dose independent rect. 19 19
853 191.77 atmosphere 995.0 270 > th dose independent rect. 13 2
855 191.79 wind 9.0 270 < th dose independent rect. 12 15
898 192.05 atmosphere 995.0 270 > th dose independent rect. 23 17
919 192.24 wind 1.0 270 > th dose independent rect. 23 18
923 192.27 radiation 1.0 270 > th dose independent rect. 13 2
970 192.33 radiation 10.0 10 < th dose dependent rect. 8 10
977 192.38 temperature 10.0 270 > th dose dependent rect. 6 16
981 192.40 atmosphere 995.0 270 > th dose dependent rect. 13 2
998 192.52 humidity 50.0 90 > th dose independent rect. 1 17