Os08g0395300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin adaptor complex, small chain family protein.
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Os08g0395300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin adaptor complex, small chain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31 | 0.262 | 11.4 | -0.481 | 0.111 | -0.459 | 0.27 | 1.32 | -0.0251 | 22.2 | 23.7 | 757 | -- | -- |
| 33.29 | 0.269 | 11.4 | -0.38 | 0.15 | -0.489 | -0.0627 | -- | 0.0461 | 22.7 | 20.9 | 2381 | -- | -- |
| 31.25 | 0.26 | 11.4 | -0.465 | 0.108 | -0.48 | -- | 1.16 | -0.0187 | 22.1 | 23.64 | 731 | -- | -- |
| 32.28 | 0.265 | 11.4 | -0.4 | 0.145 | -0.806 | -- | -- | 0.0183 | 21.4 | 19.75 | 2333 | -- | -- |
| 31.92 | 0.263 | 11.4 | -0.467 | -- | -0.526 | -- | 1.12 | -0.03 | -- | 23.8 | 758 | -- | -- |
| 38.53 | 0.291 | 11.4 | -0.125 | 0.169 | -- | -0.0461 | -- | 0.123 | 22.1 | -- | -- | -- | -- |
| 38.54 | 0.291 | 11.4 | -0.123 | 0.169 | -- | -- | -- | 0.123 | 22.2 | -- | -- | -- | -- |
| 33.46 | 0.269 | 11.4 | -0.414 | -- | -0.831 | -- | -- | 0.0144 | -- | 19.87 | 2318 | -- | -- |
| 35.39 | 0.277 | 11.4 | -- | 0.151 | -0.586 | -- | -- | 0.0915 | 21.7 | 19.31 | 2227 | -- | -- |
| 40.27 | 0.297 | 11.4 | -0.12 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 38.94 | 0.292 | 11.4 | -- | 0.168 | -- | -- | -- | 0.137 | 22.1 | -- | -- | -- | -- |
| 35.94 | 0.279 | 11.4 | -- | -- | -0.541 | -- | -- | 0.0741 | -- | 23.51 | 848 | -- | -- |
| 40.65 | 0.298 | 11.4 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.50 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 3 | 31.01 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 19 | 31.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 26 | 31.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 28 | 31.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 37 | 31.18 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 75 | 31.32 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 95 | 31.39 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 20 |
| 97 | 31.40 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 141 | 31.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 176 | 31.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 200 | 31.59 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 212 | 31.60 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 216 | 31.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 235 | 31.62 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 243 | 31.63 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 280 | 31.67 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 283 | 31.67 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 313 | 31.71 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 318 | 31.71 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 23 |
| 344 | 31.74 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 349 | 31.75 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 350 | 31.75 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 23 |
| 396 | 31.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 19 |
| 455 | 31.83 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 21 |
| 516 | 31.88 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 528 | 31.89 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 553 | 31.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 599 | 31.93 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 607 | 31.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 646 | 31.97 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 678 | 32.00 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 687 | 32.01 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 724 | 32.04 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 759 | 32.06 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 784 | 32.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 813 | 32.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 814 | 32.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 7 |
| 824 | 32.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 836 | 32.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 913 | 32.18 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 917 | 32.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 946 | 32.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 957 | 32.21 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 994 | 32.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 995 | 32.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 996 | 32.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 13 |