Os08g0375900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nudix hydrolase 22, chloroplast precursor (EC 3.6.1.-) (AtNUDT22).
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Os08g0375900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nudix hydrolase 22, chloroplast precursor (EC 3.6.1.-) (AtNUDT22).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.57 | 0.284 | 9.49 | 1.29 | 0.348 | -0.609 | 0.0197 | -0.757 | 0.18 | 23.6 | 20.5 | 10 | -- | -- |
| 36.72 | 0.284 | 9.47 | 1.42 | 0.339 | -0.671 | 0.227 | -- | 0.216 | 23.4 | 21.69 | 10 | -- | -- |
| 36.44 | 0.283 | 9.49 | 1.29 | 0.346 | -0.614 | -- | -0.764 | 0.178 | 23.7 | 21.12 | 10 | -- | -- |
| 36.93 | 0.285 | 9.47 | 1.41 | 0.339 | -0.666 | -- | -- | 0.213 | 23.6 | 21.76 | 10 | -- | -- |
| 42.24 | 0.303 | 9.46 | 1.38 | -- | -0.881 | -- | -0.533 | 0.236 | -- | 21.09 | 2 | -- | -- |
| 43.48 | 0.309 | 9.5 | 1.29 | 0.549 | -- | 0.245 | -- | 0.107 | 0.741 | -- | -- | -- | -- |
| 43.73 | 0.31 | 9.5 | 1.28 | 0.549 | -- | -- | -- | 0.106 | 0.807 | -- | -- | -- | -- |
| 42.53 | 0.304 | 9.45 | 1.47 | -- | -0.914 | -- | -- | 0.261 | -- | 21.1 | 2 | -- | -- |
| 85.09 | 0.432 | 9.53 | -- | 0.497 | -0.413 | -- | -- | -0.0432 | 0.559 | 28.22 | 5 | -- | -- |
| 62.54 | 0.37 | 9.49 | 1.3 | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
| 86.97 | 0.436 | 9.53 | -- | 0.569 | -- | -- | -- | -0.0366 | 0.909 | -- | -- | -- | -- |
| 96.02 | 0.458 | 9.51 | -- | -- | -0.679 | -- | -- | 0.0193 | -- | 24.63 | 2 | -- | -- |
| 107.18 | 0.483 | 9.52 | -- | -- | -- | -- | -- | -0.0282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.65 | temperature | 20 | 90 | > th | dose dependent | sin | 4 | NA |
| 4 | 31.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 19 |
| 8 | 31.47 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 20 | 31.88 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 23 | 31.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 44 | 32.24 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 138 | 33.13 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 171 | 33.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 201 | 33.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 263 | 33.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 300 | 33.80 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 365 | 34.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 481 | 34.52 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 16 |
| 486 | 34.54 | temperature | 25 | 270 | > th | dose independent | sin | 6 | NA |
| 497 | 34.58 | temperature | 25 | 270 | < th | dose independent | sin | 6 | NA |
| 528 | 34.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 532 | 34.67 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 756 | 35.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 760 | 35.15 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 12 |
| 767 | 35.16 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 9 |