Os08g0369400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os08g0369400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.37 | 0.383 | 7.12 | -1.18 | 0.901 | 0.439 | 0.96 | -0.532 | -0.248 | 21.5 | 1.01 | 85 | -- | -- |
| 67.06 | 0.381 | 7.13 | -1.1 | 0.918 | 0.465 | 1.42 | -- | -0.235 | 21.7 | 0.993 | 69 | -- | -- |
| 67.15 | 0.382 | 7.12 | -1.21 | 0.893 | 0.4 | -- | -1.11 | -0.247 | 21.2 | 1.55 | 61 | -- | -- |
| 75.23 | 0.404 | 7.12 | -1.2 | 0.878 | 0.395 | -- | -- | -0.233 | 21.2 | 1.54 | 62 | -- | -- |
| 86.31 | 0.433 | 7.11 | -1.42 | -- | 0.517 | -- | -0.359 | -0.411 | -- | 0.5848 | 745 | -- | -- |
| 73.08 | 0.401 | 7.11 | -1.16 | 0.616 | -- | 1.43 | -- | -0.217 | 20 | -- | -- | -- | -- |
| 77.91 | 0.413 | 7.11 | -1.19 | 0.644 | -- | -- | -- | -0.212 | 19.1 | -- | -- | -- | -- |
| 78.31 | 0.412 | 7.12 | -1.3 | -- | 0.895 | -- | -- | -0.282 | -- | 0.71 | 907 | -- | -- |
| 113.45 | 0.496 | 7.09 | -- | 0.779 | 0.316 | -- | -- | -0.135 | 20.9 | 3.579 | 68 | -- | -- |
| 99.8 | 0.467 | 7.09 | -1.21 | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
| 115.52 | 0.503 | 7.08 | -- | 0.657 | -- | -- | -- | -0.0791 | 19 | -- | -- | -- | -- |
| 118.4 | 0.507 | 7.11 | -- | -- | 0.974 | -- | -- | -0.266 | -- | 7.899 | 2203 | -- | -- |
| 138.22 | 0.549 | 7.06 | -- | -- | -- | -- | -- | -0.0897 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.01 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 10 |
| 7 | 62.82 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 9 | 62.85 | radiation | 20.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 11 | 62.92 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 12 | 62.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 16 | 62.99 | radiation | 10.0 | 30 | < th | dose independent | sin | 11 | NA |
| 24 | 63.21 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 5 |
| 28 | 63.33 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 35 | 63.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 42 | 63.55 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 44 | 63.59 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 46 | 63.60 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 8 |
| 50 | 63.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 22 |
| 55 | 63.66 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 58 | 63.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 60 | 63.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 66 | 63.73 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 20 | 12 |
| 68 | 63.74 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 13 |
| 72 | 63.78 | humidity | 90.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 76 | 63.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 14 |
| 77 | 63.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 92 | 63.90 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 20 |
| 100 | 63.93 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 102 | 63.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 121 | 64.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 123 | 64.01 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 2 |
| 126 | 64.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 129 | 64.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 10 |
| 130 | 64.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 159 | 64.14 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 10 |
| 162 | 64.16 | radiation | 10.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 182 | 64.25 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 185 | 64.26 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 200 | 64.30 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 18 |
| 201 | 64.31 | temperature | 30.0 | 720 | < th | dose independent | sin | 1 | NA |
| 203 | 64.31 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 15 |
| 216 | 64.35 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 9 |
| 242 | 64.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 275 | 64.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 276 | 64.45 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 304 | 64.53 | temperature | 30.0 | 270 | < th | dose independent | sin | 16 | NA |
| 320 | 64.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 388 | 64.64 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 11 |
| 394 | 64.65 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 14 |
| 398 | 64.65 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 413 | 64.69 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 419 | 64.70 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 423 | 64.70 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 424 | 64.70 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 431 | 64.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 433 | 64.70 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 449 | 64.73 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 454 | 64.73 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 459 | 64.74 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 469 | 64.76 | radiation | 1.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 472 | 64.77 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 15 |
| 480 | 64.79 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 484 | 64.80 | wind | 5.0 | 720 | < th | dose independent | rect. | 4 | 5 |
| 487 | 64.80 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 16 |
| 488 | 64.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 499 | 64.82 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 512 | 64.85 | atmosphere | 1015.0 | 30 | < th | dose dependent | sin | 17 | NA |
| 516 | 64.86 | wind | 9.0 | 90 | < th | dose independent | rect. | 20 | 9 |
| 519 | 64.86 | temperature | 30.0 | 90 | < th | dose independent | rect. | 20 | 9 |
| 520 | 64.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 20 | 9 |
| 553 | 64.88 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 556 | 64.88 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 564 | 64.90 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 9 |
| 570 | 64.90 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 9 |
| 572 | 64.91 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 585 | 64.93 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 589 | 64.94 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 12 |
| 612 | 64.97 | radiation | 20.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 623 | 64.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 632 | 64.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 635 | 64.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 638 | 64.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 642 | 64.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 647 | 64.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 655 | 64.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 664 | 64.99 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 16 | NA |
| 679 | 65.02 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 1 |
| 697 | 65.04 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 707 | 65.05 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 720 | 65.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 752 | 65.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 754 | 65.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 5 |
| 788 | 65.16 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 801 | 65.17 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 812 | 65.19 | temperature | 30.0 | 720 | < th | dose independent | sin | 10 | NA |
| 817 | 65.19 | temperature | 10.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 822 | 65.20 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 18 | NA |
| 830 | 65.21 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 15 | NA |
| 835 | 65.21 | temperature | 10.0 | 10 | > th | dose dependent | sin | 14 | NA |
| 840 | 65.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 875 | 65.26 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 14 |
| 876 | 65.26 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 885 | 65.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 934 | 65.31 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 953 | 65.34 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 5 |