Os08g0361000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0361000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.04 | 0.319 | 8.97 | -0.339 | 0.465 | -0.409 | -0.429 | -0.512 | 0.404 | 11.7 | 1012 | 9823 | -- | -- |
| 45.96 | 0.316 | 8.98 | -0.516 | 0.446 | -0.397 | -0.456 | -- | 0.364 | 11.8 | 1012 | 12601 | -- | -- |
| 46.52 | 0.318 | 8.96 | -0.4 | 0.465 | -0.384 | -- | -0.354 | 0.406 | 11.6 | 1012 | 13252 | -- | -- |
| 46.75 | 0.318 | 8.99 | -0.554 | 0.463 | -0.409 | -- | -- | 0.35 | 11.6 | 1012 | 12838 | -- | -- |
| 59.96 | 0.361 | 8.98 | -0.461 | -- | -0.416 | -- | -0.305 | 0.382 | -- | 1012 | 13213 | -- | -- |
| 53.21 | 0.342 | 8.96 | -0.324 | 0.457 | -- | -0.455 | -- | 0.475 | 11.7 | -- | -- | -- | -- |
| 54.1 | 0.344 | 8.96 | -0.343 | 0.459 | -- | -- | -- | 0.472 | 11.6 | -- | -- | -- | -- |
| 60.25 | 0.362 | 9 | -0.568 | -- | -0.403 | -- | -- | 0.345 | -- | 1012 | 13170 | -- | -- |
| 53.52 | 0.341 | 8.97 | -- | 0.47 | -0.262 | -- | -- | 0.44 | 11.6 | 1011 | 15910 | -- | -- |
| 67.37 | 0.384 | 8.97 | -0.356 | -- | -- | -- | -- | 0.467 | -- | -- | -- | -- | -- |
| 57.2 | 0.354 | 8.95 | -- | 0.463 | -- | -- | -- | 0.511 | 11.6 | -- | -- | -- | -- |
| 67.22 | 0.382 | 8.98 | -- | -- | -0.268 | -- | -- | 0.432 | -- | 1010 | 15788 | -- | -- |
| 70.71 | 0.392 | 8.96 | -- | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.08 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 14 | 10 |
| 14 | 45.18 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 44 | 45.45 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 52 | 45.49 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 55 | 45.50 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 59 | 45.52 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 66 | 45.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 71 | 45.55 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 95 | 45.62 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 16 | NA |
| 110 | 45.64 | radiation | 10 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 134 | 45.68 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 176 | 45.74 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 183 | 45.74 | humidity | 50 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 187 | 45.75 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 189 | 45.76 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 202 | 45.76 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 213 | 45.77 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 231 | 45.78 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 242 | 45.79 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 256 | 45.81 | wind | 1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 266 | 45.81 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 313 | 45.84 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 17 | NA |
| 322 | 45.84 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 345 | 45.86 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 358 | 45.87 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 16 | NA |
| 379 | 45.88 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 404 | 45.90 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 463 | 45.93 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 464 | 45.93 | humidity | 50 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 518 | 45.96 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 537 | 45.97 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 551 | 45.98 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 579 | 45.99 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 601 | 46.00 | humidity | 50 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 625 | 46.01 | radiation | 20 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 662 | 46.02 | radiation | 20 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 691 | 46.03 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 698 | 46.03 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 704 | 46.03 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 744 | 46.05 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 762 | 46.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 772 | 46.06 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 795 | 46.06 | humidity | 50 | 43200 | < th | dose dependent | sin | 6 | NA |
| 904 | 46.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 992 | 46.11 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 6 |