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Os08g0338900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0131) R2 : 0.00166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.024 (0.0276) R2dN8 : 0.00214 R2N8 : 0.00166
σ : 0.247
deviance : 28.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.27 0.217 10.6 0.399 0.26 -0.202 -0.0519 -1.3 0.0567 7.62 18.8 6095 -- --
21.86 0.218 10.6 0.357 0.24 0.365 0.121 -- 0.0267 7.67 16.48 6303 -- --
21.15 0.214 10.6 0.379 0.254 -0.273 -- -1.55 0.0544 7.55 18.3 7653 -- --
21.67 0.217 10.6 0.386 0.259 0.394 -- -- 0.0449 7.57 16.37 7590 -- --
24.73 0.232 10.6 0.376 -- -0.3 -- -1.61 0.0615 -- 18.3 7790 -- --
23.14 0.225 10.6 0.214 0.26 -- -0.0429 -- -0.00401 7.58 -- -- -- --
23.14 0.225 10.6 0.213 0.26 -- -- -- -0.00393 7.59 -- -- -- --
25.28 0.234 10.6 0.392 -- 0.406 -- -- 0.0533 -- 16.5 7829 -- --
23.95 0.229 10.6 -- 0.262 0.279 -- -- -0.0238 7.51 16.37 7590 -- --
26.77 0.242 10.6 0.217 -- -- -- -- 1.72e-05 -- -- -- -- --
24.34 0.231 10.6 -- 0.262 -- -- -- -0.0277 7.54 -- -- -- --
27.35 0.244 10.7 -- -- -0.119 -- -- -0.0657 -- 22.02 47520 -- --
28.01 0.247 10.7 -- -- -- -- -- -0.024 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.72 wind 3 43200 < th dose independent rect. 2 1
2 20.77 wind 3 43200 > th dose independent rect. 2 1
3 20.77 humidity 90 14400 < th dose independent rect. 1 8
4 20.78 radiation 20 4320 < th dose independent rect. 2 4
9 20.80 wind 1 43200 < th dose dependent rect. 8 5
10 20.82 wind 1 43200 < th dose dependent rect. 8 3
12 20.83 humidity 90 14400 < th dose independent rect. 19 14
18 20.85 humidity 90 14400 < th dose independent rect. 5 3
31 20.88 wind 1 43200 < th dose independent rect. 8 3
32 20.88 humidity 90 14400 > th dose independent rect. 3 5
38 20.89 humidity 90 14400 > th dose independent rect. 2 7
45 20.90 humidity 90 14400 < th dose independent sin 8 NA
50 20.90 humidity 80 43200 < th dose dependent rect. 4 1
51 20.91 humidity 80 14400 > th dose independent rect. 10 1
66 20.92 humidity 90 14400 > th dose independent rect. 19 13
75 20.93 wind 1 43200 > th dose independent rect. 8 2
79 20.93 wind 3 43200 < th dose dependent rect. 5 9
119 20.96 humidity 80 14400 > th dose dependent rect. 9 1
129 20.97 humidity 90 14400 < th dose independent rect. 19 7
134 20.97 wind 3 43200 < th dose independent rect. 1 15
143 20.98 humidity 90 14400 > th dose independent sin 8 NA
154 20.98 humidity 80 14400 > th dose dependent rect. 8 3
162 20.98 temperature 30 90 < th dose dependent rect. 5 22
163 20.98 temperature 15 90 > th dose dependent rect. 11 23
175 20.99 wind 3 43200 > th dose independent rect. 1 15
179 20.99 wind 1 43200 < th dose dependent rect. 2 1
183 21.00 wind 3 43200 > th dose independent rect. 5 2
184 21.00 wind 3 43200 > th dose independent rect. 1 3
205 21.00 radiation 20 4320 > th dose dependent rect. 6 2
224 21.00 temperature 15 270 > th dose dependent rect. 11 18
225 21.00 temperature 15 270 > th dose dependent rect. 9 22
229 21.01 wind 3 43200 < th dose independent rect. 5 2
230 21.01 humidity 80 43200 > th dose independent rect. 4 2
231 21.01 humidity 90 14400 < th dose independent rect. 20 3
234 21.01 humidity 90 14400 > th dose independent rect. 18 10
236 21.01 radiation 1 4320 > th dose independent rect. 18 11
263 21.02 wind 3 43200 < th dose independent rect. 1 6
287 21.02 wind 3 43200 < th dose dependent rect. 1 15
293 21.03 radiation 30 4320 < th dose independent rect. 6 2
298 21.03 wind 3 43200 > th dose independent rect. 1 6
303 21.03 radiation 30 4320 < th dose independent rect. 22 10
324 21.03 wind 3 43200 < th dose dependent sin 3 NA
339 21.04 radiation 30 4320 < th dose independent rect. 24 8
353 21.04 radiation 30 4320 < th dose independent rect. 18 14
366 21.04 wind 3 43200 < th dose dependent rect. 12 1
383 21.05 humidity 80 14400 < th dose independent rect. 10 1
395 21.05 radiation 10 4320 < th dose independent rect. 17 13
426 21.06 radiation 20 4320 > th dose independent rect. 6 2
437 21.06 humidity 90 14400 > th dose independent rect. 19 6
487 21.07 humidity 70 43200 > th dose independent rect. 7 2
517 21.07 humidity 80 14400 > th dose dependent rect. 5 6
519 21.07 humidity 80 14400 > th dose dependent rect. 1 9
524 21.07 humidity 80 14400 > th dose dependent rect. 19 16
528 21.08 radiation 1 4320 > th dose independent rect. 18 1
533 21.08 humidity 90 14400 > th dose independent rect. 19 4
584 21.08 humidity 80 14400 > th dose dependent rect. 21 13
629 21.09 humidity 90 14400 > th dose dependent rect. 19 7
650 21.10 wind 3 43200 < th dose independent sin 2 NA
656 21.10 humidity 90 14400 > th dose independent rect. 20 2
672 21.10 radiation 10 4320 < th dose independent rect. 17 8
734 21.11 humidity 60 43200 > th dose independent rect. 9 1
755 21.11 humidity 90 14400 > th dose independent rect. 24 22
766 21.11 humidity 90 14400 < th dose independent rect. 24 23
796 21.12 humidity 90 14400 < th dose independent no NA NA
799 21.12 humidity 60 43200 < th dose independent rect. 9 1
801 21.12 radiation 10 4320 < th dose independent rect. 17 3
836 21.12 wind 1 43200 > th dose dependent rect. 5 2
864 21.13 wind 3 43200 > th dose independent sin 2 NA
866 21.13 humidity 90 14400 > th dose independent no NA NA
870 21.13 humidity 80 43200 < th dose independent rect. 24 1
879 21.13 radiation 10 4320 < th dose independent rect. 17 6
882 21.13 wind 1 43200 > th dose independent rect. 5 8
898 21.13 humidity 90 14400 > th dose independent rect. 2 23
901 21.13 humidity 90 14400 < th dose independent rect. 3 23
905 21.13 humidity 80 14400 > th dose dependent sin 8 NA
907 21.13 humidity 90 14400 > th dose dependent sin 14 NA
940 21.13 humidity 90 14400 > th dose dependent rect. 1 22
984 21.14 humidity 90 14400 < th dose independent rect. 5 21
993 21.14 humidity 90 14400 > th dose independent rect. 5 23