BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0338900 Os08g0338900|AK073476
         (453 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79020.1  | chr1:29727282-29730059 REVERSE LENGTH=454          453   e-127
AT1G16690.1  | chr1:5706458-5709371 FORWARD LENGTH=440            441   e-124

>AT1G79020.1 | chr1:29727282-29730059 REVERSE LENGTH=454
          Length = 453

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/444 (54%), Positives = 297/444 (66%), Gaps = 19/444 (4%)

Query: 1   MSRLSFRPRPLDIHKKLPIVKSARELEDDETTLALRAAPPVLRHSQPEPAADGEAHPTSS 60
           MSRLSFRPRPLDIHKKLPI+KS ++ EDDET  +      +LR +  E   D E  P  S
Sbjct: 1   MSRLSFRPRPLDIHKKLPILKSFKDFEDDETPTSTTRNSQLLRIASVE--VDNEVAPVPS 58

Query: 61  KKNVQEIPTPQYDDVDTYERDYTRTFAQPTSYIRARGARAEIGEFVXXXXXXXXXXXXXX 120
           KK   EIPTPQ+  VDTYERDY+ TF QP SY+RARGAR+E+GEFV              
Sbjct: 59  KKPASEIPTPQFVIVDTYERDYSPTFGQPASYLRARGARSELGEFVEYDLDNEDEDWLYE 118

Query: 121 XXXXRKNLNPEKLEVLLFKLETLDHKARERAGIITPTFLGPIPVILQLDSAMEALQYLSV 180
               +K L PEKLE+++FKLE LDHK RERAG+ITPT   P+PV+LQ D+A + LQ LS+
Sbjct: 119 FDKDKKELPPEKLEIIIFKLEVLDHKTRERAGVITPTLGSPVPVLLQFDAASDVLQVLSI 178

Query: 181 RYAVFQAVYNYWKSKRERWQKPILRRLQPPPPVNDTNPYNVFRPREKAYRLHTRRMQRRE 240
            Y  FQA++NYWK KR+RWQKPILRRLQPPPPVNDTNPYNVFRPREK +RLHTRRMQRRE
Sbjct: 179 NYGTFQAIFNYWKEKRKRWQKPILRRLQPPPPVNDTNPYNVFRPREKVHRLHTRRMQRRE 238

Query: 241 NSVQSFDKLRVVRRNLEQAKALMGALIKREERKRETMECEVHLRRIQMRYKHEAQLIDDG 300
           N+VQSF+KLR VRRNL QA++++ ALIKREE+KR+ M+ EV L+RIQ++Y+HE +L++D 
Sbjct: 239 NNVQSFEKLRQVRRNLGQAQSILEALIKREEKKRDVMDSEVSLQRIQLQYRHETELLEDS 298

Query: 301 IALSGLQ------QAGSSEDDYADSDDTANEQPYVR-SVAFHPRFPDNKLSAVXXXXXXX 353
           +A+ G Q      + GSS+D+  DSDD  + +   R +V    RF +  L+A        
Sbjct: 299 LAMPGFQPTTTSYKFGSSDDELMDSDDHTSTRVRTRPAVIPSSRFTNLNLNASHPGGIKQ 358

Query: 354 XXXXXXXXHQNGWLFKRVPEMRDPEEPVMLFTRPIDPDKLKMAGIRPPLDPPIDSGTTAP 413
                   H  GWL +      DP EPVMLFT+P+ PDKL  AGI PP     DS    P
Sbjct: 359 EVRRRQSQH--GWLHR-----LDPNEPVMLFTKPLVPDKLAAAGIVPPTP---DSSPGQP 408

Query: 414 PFRWQAXXXXXXXXXFDRWNPFLQ 437
           P R+Q          FDRWNP +Q
Sbjct: 409 PSRFQGRIGRGGRIIFDRWNPLMQ 432



>AT1G16690.1 | chr1:5706458-5709371 FORWARD LENGTH=440
          Length = 439

 Score =  441 bits (1133), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/447 (53%), Positives = 296/447 (66%), Gaps = 23/447 (5%)

Query: 1   MSRLSFRPRPLDIHKKLPIVKSARELEDDETTLALRAAPPVLRHSQPEPAADGEAHPTSS 60
           MSRLSFRPRPLDIHKKLPI+KS ++ ED++   ++     +LR S  E   +    P  S
Sbjct: 1   MSRLSFRPRPLDIHKKLPILKSFKDFEDEDNPSSITRNSQLLRISAVEVVDNEVQPPVPS 60

Query: 61  KKNVQEIPTPQYDDVDTYERDYTRTFAQPTSYIRARGARAEIGEFVXXXXXXXXXXXXXX 120
           KK + EIPTPQY  VDTYERDY+RTF QP SY+RARGARAE+GEFV              
Sbjct: 61  KKLISEIPTPQYLVVDTYERDYSRTFNQPASYLRARGARAELGEFVEYDLDNDDDDWLYE 120

Query: 121 XXXXRKNLNPEKLEVLLFKLETLDHKARERAGIITPTFLGPIPVILQLDSAMEALQYLSV 180
                  L+PE LE+++FKLE LDHKARERAG+ITPT   P+PV+LQ D+A EAL+YLS+
Sbjct: 121 YNKETMILSPEMLEIVIFKLEVLDHKARERAGVITPTLGLPVPVLLQPDAAGEALKYLSI 180

Query: 181 RYAVFQAVYNYWKSKRERWQKPILRRLQPPPPVNDTNPYNVFRPREKAYRLHTRRMQRRE 240
           +Y VF A+Y+YWK+KRE WQKPILRRLQPPPPVNDTNPYNVFRPREKA+RLH RRMQ+RE
Sbjct: 181 KYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKAHRLHARRMQQRE 240

Query: 241 NSVQSFDKLRVVRRNLEQAKALMGALIKREERKRETMECEVHLRRIQMRYKHEAQLIDDG 300
           N+ QSF+KLR VRRNL+QAK ++ ALIKREE+KR+ M  EV L+RIQ++YK+E +L++D 
Sbjct: 241 NNAQSFEKLRQVRRNLDQAKTILEALIKREEKKRDFMASEVSLQRIQLKYKNETELLEDS 300

Query: 301 IALSGL-----QQAGSSEDDYADSDDTANEQPYVR-SVAFHPRFPDNKLSAVXXXXXXXX 354
           +AL+G       + GSSED++ DSDD    Q   R S   H RF D+ L+          
Sbjct: 301 LALAGFPLSTAYRFGSSEDEFMDSDDPTTTQTCTRPSFTPHRRFTDSNLA------RAQA 354

Query: 355 XXXXXXXHQNGWLFKRVPEMRDPEEPVMLFTRPIDPDKLKMAGIRPPLDPPIDSGTTAPP 414
                   + GWL K      +P EPVMLFT+ + PDKL  AGI PP D    SG     
Sbjct: 355 GSIKQEARRLGWLHK-----LNPNEPVMLFTKALVPDKLAAAGIIPPSDA--RSGRA--- 404

Query: 415 FRWQAXXXXXXXXXFDRWNPFLQVPVG 441
            R+Q          FDRWNP  Q  + 
Sbjct: 405 -RFQGRMGRGGRIVFDRWNPLNQAHIN 430



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,594,179
Number of extensions: 394955
Number of successful extensions: 1176
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1166
Number of HSP's successfully gapped: 2
Length of query: 453
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 351
Effective length of database: 8,310,137
Effective search space: 2916858087
Effective search space used: 2916858087
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)