Os08g0328300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0328300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ENT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.15 | 0.226 | 9.95 | -0.175 | 0.193 | -0.96 | -0.451 | -0.36 | 0.0868 | 6.65 | 31.3 | 1512 | -- | -- |
| 23.23 | 0.224 | 9.95 | -0.254 | 0.275 | -0.937 | -0.43 | -- | 0.0882 | 6.7 | 48.92 | 1902 | -- | -- |
| 23.55 | 0.226 | 9.95 | -0.214 | 0.28 | -0.952 | -- | -0.3 | 0.0872 | 6.93 | 32.09 | 1981 | -- | -- |
| 23.66 | 0.227 | 9.96 | -0.268 | 0.277 | -0.944 | -- | -- | 0.0832 | 6.83 | 33.6 | 1983 | -- | -- |
| 25.48 | 0.235 | 9.96 | -0.207 | -- | -0.956 | -- | -0.205 | 0.104 | -- | 44.09 | 1390 | -- | -- |
| 38.58 | 0.291 | 9.92 | 0.0524 | 0.209 | -- | -0.448 | -- | 0.262 | 6.4 | -- | -- | -- | -- |
| 39.06 | 0.293 | 9.92 | 0.0459 | 0.208 | -- | -- | -- | 0.264 | 6.05 | -- | -- | -- | -- |
| 25.51 | 0.235 | 9.96 | -0.252 | -- | -0.958 | -- | -- | 0.0917 | -- | 67.73 | 1390 | -- | -- |
| 25.1 | 0.235 | 9.95 | -- | 0.472 | -1.15 | -- | -- | 0.122 | 3.73 | 41.18 | 1547 | -- | -- |
| 41.3 | 0.3 | 9.92 | 0.0519 | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
| 39.11 | 0.293 | 9.92 | -- | 0.209 | -- | -- | -- | 0.258 | 6.04 | -- | -- | -- | -- |
| 26.97 | 0.242 | 9.95 | -- | -- | -0.852 | -- | -- | 0.136 | -- | 93.53 | 1384 | -- | -- |
| 41.37 | 0.3 | 9.92 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 22.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 8 | 22.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 23 | 22.41 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 48 | 22.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 50 | 22.48 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 73 | 22.51 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 593 | 22.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 676 | 23.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 767 | 23.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 853 | 23.09 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 871 | 23.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 872 | 23.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |