Os08g0327400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Enoyl-ACP reductase (Fragment).
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Os08g0327400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Enoyl-ACP reductase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.39 | 0.371 | 9 | -0.42 | 0.632 | 1.26 | -0.706 | -1.84 | 0.282 | 2 | 11.85 | 2710 | -- | -- |
| 63.91 | 0.372 | 8.98 | -0.222 | 0.683 | 1.41 | -0.841 | -- | 0.232 | 1.94 | 8.369 | 9811 | -- | -- |
| 64.2 | 0.373 | 9 | -0.45 | 0.625 | 1.25 | -- | -2.06 | 0.272 | 1.87 | 11.27 | 2672 | -- | -- |
| 66.49 | 0.38 | 8.97 | -0.249 | 0.683 | 1.42 | -- | -- | 0.22 | 1.8 | 10.4 | 9967 | -- | -- |
| 86.34 | 0.433 | 9 | -0.479 | -- | 1.45 | -- | -2.03 | 0.25 | -- | 13.27 | 2551 | -- | -- |
| 97.66 | 0.463 | 8.87 | 0.545 | 0.75 | -- | -0.796 | -- | 0.663 | 1.99 | -- | -- | -- | -- |
| 100.03 | 0.468 | 8.87 | 0.569 | 0.747 | -- | -- | -- | 0.668 | 1.83 | -- | -- | -- | -- |
| 90.51 | 0.443 | 8.92 | 0.126 | -- | 1.61 | -- | -- | 0.41 | -- | 10.04 | 1089 | -- | -- |
| 67.48 | 0.383 | 8.96 | -- | 0.708 | 1.32 | -- | -- | 0.287 | 1.94 | 9.503 | 9189 | -- | -- |
| 133.82 | 0.541 | 8.86 | 0.6 | -- | -- | -- | -- | 0.685 | -- | -- | -- | -- | -- |
| 108.56 | 0.487 | 8.89 | -- | 0.757 | -- | -- | -- | 0.605 | 1.85 | -- | -- | -- | -- |
| 90.87 | 0.444 | 8.93 | -- | -- | 1.66 | -- | -- | 0.386 | -- | 11.19 | 1090 | -- | -- |
| 143.3 | 0.559 | 8.88 | -- | -- | -- | -- | -- | 0.619 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.13 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 2 | 59.26 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 59.28 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 4 | 59.39 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 5 | 59.41 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 7 | 59.44 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 11 | 59.58 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 19 | 59.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 20 | 59.72 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 30 | 59.87 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 31 | 59.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 36 | 59.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 40 | 59.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 58 | 59.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 170 | 60.48 | radiation | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 181 | 60.52 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 193 | 60.60 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 196 | 60.64 | radiation | 1 | 14400 | < th | dose independent | sin | 9 | NA |
| 212 | 60.71 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 219 | 60.73 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 237 | 60.77 | wind | 3 | 43200 | > th | dose dependent | sin | 5 | NA |
| 280 | 60.92 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 308 | 61.06 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 317 | 61.09 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 341 | 61.12 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 342 | 61.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 366 | 61.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 423 | 61.21 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 451 | 61.25 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 470 | 61.29 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 512 | 61.37 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 588 | 61.55 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 610 | 61.62 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 626 | 61.64 | wind | 9 | 43200 | < th | dose dependent | sin | 5 | NA |
| 630 | 61.65 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 654 | 61.70 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 672 | 61.71 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 684 | 61.74 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 714 | 61.80 | wind | 5 | 43200 | < th | dose independent | sin | 4 | NA |
| 726 | 61.82 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 733 | 61.83 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 745 | 61.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 776 | 61.91 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 777 | 61.91 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 825 | 61.92 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 856 | 61.97 | wind | 5 | 43200 | > th | dose independent | sin | 4 | NA |
| 859 | 61.97 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 874 | 61.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 896 | 62.02 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 898 | 62.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 904 | 62.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 909 | 62.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 921 | 62.03 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 15 |