Os08g0265500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lactation elevated 1 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os08g0265500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Lactation elevated 1 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.17 | 0.275 | 10.5 | -0.566 | 0.951 | 0.841 | -0.0473 | 0.464 | -0.0497 | 6.14 | 0.9 | 1426 | -- | -- |
| 34.26 | 0.273 | 10.5 | -0.528 | 0.946 | 0.733 | -0.0611 | -- | -0.0525 | 6.04 | 1.173 | 1409 | -- | -- |
| 34.17 | 0.272 | 10.5 | -0.567 | 0.949 | 0.842 | -- | 0.467 | -0.0495 | 6.09 | 0.9123 | 1419 | -- | -- |
| 34.27 | 0.273 | 10.5 | -0.531 | 0.947 | 0.727 | -- | -- | -0.0549 | 6.04 | 1.17 | 1409 | -- | -- |
| 35.91 | 0.279 | 10.5 | -0.508 | -- | 1.64 | -- | 0.174 | -0.0168 | -- | 1.326 | 2202 | -- | -- |
| 40.63 | 0.299 | 10.5 | -0.7 | 0.95 | -- | -0.0512 | -- | -0.141 | 6.26 | -- | -- | -- | -- |
| 40.64 | 0.299 | 10.5 | -0.701 | 0.95 | -- | -- | -- | -0.141 | 6.26 | -- | -- | -- | -- |
| 35.93 | 0.279 | 10.5 | -0.499 | -- | 1.64 | -- | -- | -0.0138 | -- | 1.427 | 2203 | -- | -- |
| 41.06 | 0.298 | 10.5 | -- | 0.926 | 0.973 | -- | -- | -0.0528 | 6.21 | 0.6719 | 1430 | -- | -- |
| 87.42 | 0.437 | 10.5 | -0.675 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 53.58 | 0.342 | 10.5 | -- | 0.94 | -- | -- | -- | -0.0627 | 6.3 | -- | -- | -- | -- |
| 41.42 | 0.3 | 10.5 | -- | -- | 1.73 | -- | -- | 0.0196 | -- | 0.17 | 2193 | -- | -- |
| 99.44 | 0.465 | 10.5 | -- | -- | -- | -- | -- | -0.0452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.48 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 2 | 30.66 | humidity | 50 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 8 | 31.15 | radiation | 10 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 19 | 31.62 | radiation | 10 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 22 | 31.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 31 | 31.95 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 35 | 31.99 | humidity | 50 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 48 | 32.23 | radiation | 40 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 49 | 32.25 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 55 | 32.32 | radiation | 20 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 56 | 32.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 61 | 32.39 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 16 |
| 73 | 32.53 | radiation | 40 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 74 | 32.54 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 3 |
| 96 | 32.79 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 97 | 32.79 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 98 | 32.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 99 | 32.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 163 | 33.00 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 6 |
| 172 | 33.03 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 192 | 33.10 | humidity | 50 | 270 | > th | dose independent | rect. | 15 | 16 |
| 231 | 33.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 236 | 33.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 244 | 33.23 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 4 |
| 251 | 33.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 252 | 33.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 331 | 33.35 | humidity | 50 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 348 | 33.39 | radiation | 40 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 349 | 33.40 | radiation | 1 | 1440 | < th | dose independent | sin | 21 | NA |
| 379 | 33.44 | radiation | 40 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 380 | 33.45 | humidity | 90 | 270 | < th | dose independent | rect. | 8 | 18 |
| 386 | 33.48 | radiation | 1 | 1440 | > th | dose independent | sin | 21 | NA |
| 464 | 33.62 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 16 |
| 469 | 33.63 | radiation | 20 | 270 | < th | dose independent | rect. | 15 | 16 |
| 500 | 33.66 | humidity | 50 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 527 | 33.72 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 542 | 33.75 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 16 |
| 558 | 33.77 | humidity | 90 | 270 | < th | dose independent | rect. | 20 | 19 |
| 578 | 33.81 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 4 |
| 584 | 33.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 607 | 33.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 624 | 33.86 | radiation | 1 | 270 | < th | dose independent | rect. | 4 | 15 |
| 637 | 33.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 717 | 33.96 | humidity | 90 | 270 | < th | dose independent | rect. | 20 | 7 |
| 940 | 34.18 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 944 | 34.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 970 | 34.20 | humidity | 50 | 270 | > th | dose independent | rect. | 14 | 6 |
| 986 | 34.21 | humidity | 60 | 10 | > th | dose dependent | rect. | 5 | 18 |