Os08g0250700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioredoxin domain 2 containing protein.
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Os08g0250700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioredoxin domain 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.97 | 0.169 | 12.1 | 0.139 | 0.114 | 1.19 | 0.0767 | -0.14 | 0.101 | 5.75 | 10.17 | 26 | -- | -- |
| 12.98 | 0.168 | 12.1 | 0.159 | 0.113 | 1.18 | 0.0909 | -- | 0.106 | 5.66 | 10.24 | 22 | -- | -- |
| 12.97 | 0.168 | 12.1 | 0.133 | 0.114 | 1.2 | -- | -0.17 | 0.0971 | 5.23 | 9.798 | 21 | -- | -- |
| 12.99 | 0.168 | 12.1 | 0.156 | 0.115 | 1.19 | -- | -- | 0.103 | 5.23 | 9.295 | 21 | -- | -- |
| 13.52 | 0.171 | 12.1 | 0.149 | -- | 1.1 | -- | -0.206 | 0.111 | -- | 8.426 | 19 | -- | -- |
| 26.08 | 0.239 | 12 | 0.38 | 0.263 | -- | 0.298 | -- | 0.271 | 13.3 | -- | -- | -- | -- |
| 26.44 | 0.241 | 12 | 0.391 | 0.263 | -- | -- | -- | 0.272 | 13.3 | -- | -- | -- | -- |
| 13.55 | 0.171 | 12.1 | 0.178 | -- | 1.1 | -- | -- | 0.119 | -- | 9.84 | 18 | -- | -- |
| 13.57 | 0.172 | 12.1 | -- | 0.135 | 1.27 | -- | -- | 0.0768 | 4.78 | 8.22 | 21 | -- | -- |
| 30.69 | 0.259 | 12.1 | 0.38 | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
| 30.46 | 0.258 | 12.1 | -- | 0.256 | -- | -- | -- | 0.229 | 13.3 | -- | -- | -- | -- |
| 14.34 | 0.176 | 12.1 | -- | -- | 1.16 | -- | -- | 0.0927 | -- | 10.08 | 18 | -- | -- |
| 34.51 | 0.274 | 12.1 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.00 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 2 | 13.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 7 | 13.06 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 8 | 13.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 10 | 13.18 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 11 | 13.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 12 | 13.19 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 13 | 13.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 18 | 13.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 19 | 13.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 24 | 13.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 25 | 13.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 49 | 13.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 52 | 13.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 64 | 14.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 66 | 14.15 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 68 | 14.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 77 | 14.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 88 | 14.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 91 | 14.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 93 | 14.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 124 | 14.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 198 | 14.89 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 270 | 15.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 360 | 15.23 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 467 | 15.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 475 | 15.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 498 | 15.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 528 | 15.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 600 | 15.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 618 | 15.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 631 | 15.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 646 | 15.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 805 | 15.75 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 926 | 15.79 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 984 | 15.81 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |