Os08g0243900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mu2 adaptin subunit (AP50) of AP2 domain containing protein.
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Os08g0243900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mu2 adaptin subunit (AP50) of AP2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.36 | 0.237 | 11.4 | 0.524 | 0.582 | 0.291 | -0.00573 | -0.0269 | 0.242 | 0.204 | 20.04 | 152 | -- | -- |
| 25.34 | 0.234 | 11.4 | 0.515 | 0.577 | 0.31 | -0.0275 | -- | 0.242 | 0.243 | 19.9 | 186 | -- | -- |
| 25.33 | 0.234 | 11.4 | 0.514 | 0.576 | 0.312 | -- | 0.0598 | 0.244 | 0.261 | 19.7 | 199 | -- | -- |
| 25.34 | 0.234 | 11.4 | 0.512 | 0.577 | 0.32 | -- | -- | 0.242 | 0.223 | 19.7 | 189 | -- | -- |
| 42.01 | 0.302 | 11.4 | 0.498 | -- | 0.412 | -- | 0.133 | 0.227 | -- | 19.8 | 770 | -- | -- |
| 28.24 | 0.249 | 11.4 | 0.615 | 0.534 | -- | 0.0362 | -- | 0.294 | 24 | -- | -- | -- | -- |
| 28.25 | 0.249 | 11.4 | 0.614 | 0.534 | -- | -- | -- | 0.294 | 0.00664 | -- | -- | -- | -- |
| 42.01 | 0.302 | 11.4 | 0.478 | -- | 0.411 | -- | -- | 0.224 | -- | 19.9 | 731 | -- | -- |
| 31.49 | 0.261 | 11.4 | -- | 0.585 | 0.436 | -- | -- | 0.181 | 0.235 | 19.1 | 220 | -- | -- |
| 46.18 | 0.318 | 11.4 | 0.63 | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
| 38.17 | 0.289 | 11.4 | -- | 0.542 | -- | -- | -- | 0.226 | 0.0709 | -- | -- | -- | -- |
| 47.21 | 0.32 | 11.4 | -- | -- | 0.586 | -- | -- | 0.145 | -- | 19.7 | 819 | -- | -- |
| 56.65 | 0.351 | 11.4 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 4 | 23.95 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 11 | 24.27 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 13 | 24.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 14 |
| 19 | 24.36 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 21 | 24.38 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 26 | 24.42 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 30 | 24.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 9 |
| 33 | 24.46 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 42 | 24.47 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 48 | 24.49 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 7 |
| 49 | 24.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 54 | 24.51 | temperature | 20.0 | 720 | > th | dose independent | sin | 18 | NA |
| 63 | 24.53 | temperature | 20.0 | 720 | < th | dose independent | sin | 19 | NA |
| 87 | 24.58 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 99 | 24.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 111 | 24.62 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 117 | 24.64 | temperature | 20.0 | 270 | > th | dose independent | sin | 16 | NA |
| 129 | 24.66 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 132 | 24.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 134 | 24.67 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 141 | 24.70 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 155 | 24.71 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 157 | 24.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 162 | 24.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 166 | 24.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 173 | 24.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 192 | 24.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 198 | 24.76 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 209 | 24.78 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 213 | 24.79 | temperature | 20.0 | 270 | < th | dose independent | sin | 16 | NA |
| 237 | 24.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 242 | 24.81 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 264 | 24.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 273 | 24.84 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 290 | 24.85 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 313 | 24.87 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 333 | 24.89 | wind | 9.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 345 | 24.89 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 359 | 24.90 | wind | 7.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 369 | 24.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 383 | 24.93 | wind | 9.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 416 | 24.95 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 473 | 25.00 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 484 | 25.01 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 492 | 25.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 23 |
| 494 | 25.02 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 10 | 17 |
| 561 | 25.08 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 607 | 25.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 21 |
| 630 | 25.12 | temperature | 20.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 631 | 25.12 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 671 | 25.16 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 672 | 25.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 685 | 25.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 720 | 25.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 737 | 25.20 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 766 | 25.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 23 |
| 793 | 25.24 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 801 | 25.24 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 837 | 25.27 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 852 | 25.28 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 857 | 25.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 891 | 25.31 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 924 | 25.33 | wind | 9.0 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 930 | 25.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 23 |