Os08g0243600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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Os08g0243600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.67 | 0.198 | 11.4 | -0.595 | 0.869 | -0.506 | 0.104 | -0.84 | -0.295 | 8.96 | 21.5 | 1381 | -- | -- |
| 19.03 | 0.203 | 11.4 | -0.396 | 0.846 | -0.421 | 0.127 | -- | -0.245 | 8.89 | 21.7 | 1177 | -- | -- |
| 17.71 | 0.196 | 11.4 | -0.593 | 0.868 | -0.507 | -- | -0.845 | -0.294 | 8.97 | 21.49 | 1380 | -- | -- |
| 19.08 | 0.203 | 11.4 | -0.392 | 0.847 | -0.421 | -- | -- | -0.247 | 8.89 | 21.72 | 1181 | -- | -- |
| 45.99 | 0.316 | 11.4 | -0.419 | -- | -0.676 | -- | -0.239 | -0.135 | -- | 25.2 | 662 | -- | -- |
| 25.02 | 0.234 | 11.4 | -0.561 | 0.872 | -- | 0.108 | -- | -0.374 | 9.05 | -- | -- | -- | -- |
| 25.06 | 0.234 | 11.4 | -0.557 | 0.872 | -- | -- | -- | -0.374 | 9.05 | -- | -- | -- | -- |
| 46.11 | 0.316 | 11.4 | -0.358 | -- | -0.681 | -- | -- | -0.115 | -- | 25.2 | 655 | -- | -- |
| 21.93 | 0.218 | 11.4 | -- | 0.854 | -0.481 | -- | -- | -0.196 | 8.85 | 21.6 | 2616 | -- | -- |
| 68.8 | 0.388 | 11.4 | -0.559 | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
| 33.25 | 0.27 | 11.4 | -- | 0.871 | -- | -- | -- | -0.312 | 9.1 | -- | -- | -- | -- |
| 49.32 | 0.327 | 11.4 | -- | -- | -0.735 | -- | -- | -0.0891 | -- | 25.3 | 686 | -- | -- |
| 77.05 | 0.41 | 11.4 | -- | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 18.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 3 | 18.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 10 | 18.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 11 | 18.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 25 | 18.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 33 | 18.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 45 | 18.62 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 57 | 18.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 61 | 18.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 89 | 18.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 121 | 18.73 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 125 | 18.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 132 | 18.74 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 140 | 18.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 163 | 18.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 221 | 18.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 264 | 18.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 273 | 18.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 275 | 18.85 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 476 | 18.92 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 520 | 18.94 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 529 | 18.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 541 | 18.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 574 | 18.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 575 | 18.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 682 | 19.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 699 | 19.02 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 728 | 19.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 845 | 19.08 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 909 | 19.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 915 | 19.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 946 | 19.14 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 9 |