Os08g0230200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0230200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.7 | 0.525 | 9.66 | -0.312 | 0.013 | -2.08 | -0.669 | 4.25 | 0.00392 | 15.5 | 50.8 | 984 | -- | -- |
| 127.04 | 0.525 | 9.6 | -0.119 | 0.00798 | -0.956 | 0.624 | -- | 0.00247 | 4.21 | 52 | 996 | -- | -- |
| 125.73 | 0.522 | 9.66 | -0.335 | 0.0801 | -2.1 | -- | 4.11 | 0.00152 | 9.83 | 50.74 | 971 | -- | -- |
| 126.61 | 0.524 | 9.6 | -0.114 | 0.00518 | -0.809 | -- | -- | 0.0215 | 4.2 | 55.07 | 1058 | -- | -- |
| 126.06 | 0.523 | 9.66 | -0.322 | -- | -2.08 | -- | 4.12 | -0.000183 | -- | 50.87 | 971 | -- | -- |
| 144.36 | 0.563 | 9.63 | 0.0612 | 0.089 | -- | 0.706 | -- | -0.108 | 3.56 | -- | -- | -- | -- |
| 145.89 | 0.566 | 9.63 | 0.0494 | 0.0922 | -- | -- | -- | -0.112 | 3.27 | -- | -- | -- | -- |
| 126.61 | 0.524 | 9.6 | -0.108 | -- | -0.811 | -- | -- | 0.0209 | -- | 55 | 1058 | -- | -- |
| 126.53 | 0.524 | 9.6 | -- | 0.0714 | -0.826 | -- | -- | 0.042 | 9.94 | 55.86 | 1058 | -- | -- |
| 146.37 | 0.565 | 9.63 | 0.0533 | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
| 145.95 | 0.565 | 9.64 | -- | 0.0932 | -- | -- | -- | -0.117 | 3.27 | -- | -- | -- | -- |
| 126.92 | 0.525 | 9.6 | -- | -- | -0.794 | -- | -- | 0.0295 | -- | 55.46 | 1058 | -- | -- |
| 146.44 | 0.565 | 9.63 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.35 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 110.42 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 3 | 112.87 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 17 | 113.83 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 23 | 115.32 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 115.50 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 27 | 115.65 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 29 | 115.96 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 31 | 116.12 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 43 | 116.34 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 45 | 116.51 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 59 | 116.71 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 87 | 117.22 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 104 | 117.68 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 2 |
| 106 | 117.95 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 123 | 118.17 | humidity | 90 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 124 | 118.31 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 128 | 118.43 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 203 | 120.16 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 6 |
| 207 | 120.22 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 210 | 120.28 | humidity | 90 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 221 | 120.47 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 16 |
| 228 | 120.61 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 12 |
| 236 | 120.74 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 1 |
| 244 | 120.91 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 7 |
| 274 | 121.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 277 | 121.27 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 284 | 121.32 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 4 |
| 309 | 121.85 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 344 | 122.73 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 399 | 123.16 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 431 | 123.49 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 5 |
| 518 | 123.84 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 545 | 123.94 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 13 |
| 557 | 124.05 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |
| 656 | 124.52 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 749 | 124.72 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 753 | 124.78 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 756 | 124.81 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 780 | 124.90 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 4 | 1 |
| 853 | 125.07 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 3 |
| 887 | 125.14 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 930 | 125.31 | wind | 1 | 30 | > th | dose independent | sin | 5 | NA |