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Os08g0192800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Bromodomain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0192) R2 : 0.364
β1 : -0.984 (0.0705) R2dD : 0.282 R2D : 0.153
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.436 (0.0411) R2dN8 : 0.211 R2N8 : 0.0814
σ : 0.361
deviance : 59.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.21 0.287 11.9 -0.87 0.467 0.512 -0.403 0.563 -0.43 20.9 5 101 -- --
37.76 0.286 11.9 -0.876 0.475 0.45 -0.396 -- -0.419 20.9 5.1 101 -- --
37.75 0.286 11.9 -0.861 0.472 0.498 -- 0.533 -0.43 20.8 5 101 -- --
38.07 0.287 11.9 -0.871 0.471 0.42 -- -- -0.424 20.8 4.867 101 -- --
47.03 0.319 11.9 -0.822 -- 0.583 -- 0.0981 -0.44 -- 4.2 404 -- --
42.34 0.305 11.9 -0.986 0.561 -- -0.365 -- -0.427 19.7 -- -- -- --
42.72 0.306 11.9 -0.976 0.562 -- -- -- -0.428 19.7 -- -- -- --
46.6 0.318 11.9 -0.826 -- 0.573 -- -- -0.454 -- 3.794 421 -- --
57.2 0.352 11.9 -- 0.46 0.579 -- -- -0.339 20.8 5.1 102 -- --
59.71 0.361 11.9 -0.984 -- -- -- -- -0.436 -- -- -- -- --
67.84 0.385 11.9 -- 0.57 -- -- -- -0.319 19.5 -- -- -- --
63.2 0.37 11.9 -- -- 0.746 -- -- -0.355 -- 3.9 423 -- --
85.23 0.431 11.8 -- -- -- -- -- -0.327 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.19 atmosphere 1005.0 10 > th dose independent rect. 12 6
2 34.30 atmosphere 1005.0 90 > th dose independent rect. 12 5
3 34.31 wind 3.0 270 > th dose independent rect. 11 4
5 34.44 atmosphere 1005.0 10 > th dose dependent rect. 12 6
7 34.52 temperature 25.0 90 > th dose independent rect. 17 14
9 34.60 wind 1.0 90 > th dose dependent rect. 12 5
22 35.03 atmosphere 1005.0 270 > th dose dependent rect. 12 2
32 35.23 wind 3.0 270 > th dose independent rect. 12 2
34 35.24 wind 5.0 90 > th dose independent rect. 12 18
64 35.64 temperature 25.0 90 > th dose dependent rect. 17 14
77 35.77 humidity 60.0 10 > th dose independent rect. 12 6
86 35.86 precipitation 0.1 270 < th dose independent rect. 15 20
89 35.86 precipitation 0.1 270 < th dose dependent rect. 15 20
100 35.90 humidity 60.0 90 > th dose independent rect. 12 5
101 35.90 radiation 1.0 30 > th dose independent rect. 5 7
113 35.92 temperature 25.0 90 > th dose independent rect. 17 10
136 36.09 radiation 1.0 90 > th dose independent rect. 17 19
143 36.12 precipitation 0.1 90 < th dose independent rect. 17 19
144 36.12 precipitation 0.1 90 < th dose dependent rect. 17 19
164 36.16 wind 5.0 90 < th dose independent rect. 17 19
165 36.16 temperature 10.0 90 > th dose dependent rect. 17 8
168 36.18 wind 7.0 270 < th dose independent rect. 15 20
172 36.20 temperature 10.0 270 > th dose independent rect. 11 4
174 36.20 atmosphere 1015.0 270 < th dose independent rect. 11 4
179 36.20 temperature 10.0 270 > th dose independent rect. 15 20
182 36.20 wind 1.0 90 > th dose dependent rect. 12 18
187 36.22 wind 9.0 270 < th dose independent rect. 11 4
189 36.22 wind 9.0 90 < th dose independent rect. 17 19
195 36.23 precipitation 0.1 270 < th dose independent rect. 11 4
197 36.23 precipitation 0.1 270 < th dose dependent rect. 11 4
200 36.25 temperature 30.0 30 < th dose independent rect. 12 5
202 36.26 atmosphere 995.0 270 > th dose independent rect. 11 4
205 36.27 wind 9.0 90 < th dose dependent rect. 17 19
209 36.28 atmosphere 995.0 90 > th dose independent rect. 17 19
210 36.28 atmosphere 995.0 270 > th dose independent rect. 15 20
218 36.29 temperature 10.0 90 > th dose independent rect. 17 19
226 36.31 wind 5.0 90 > th dose independent rect. 12 11
229 36.33 wind 5.0 90 < th dose independent rect. 15 22
233 36.34 temperature 25.0 90 > th dose independent rect. 17 19
234 36.34 atmosphere 1015.0 90 < th dose independent rect. 17 19
237 36.35 wind 9.0 10 < th dose independent rect. 18 18
238 36.35 precipitation 0.1 10 < th dose independent rect. 18 18
240 36.35 precipitation 0.1 10 < th dose dependent rect. 18 18
262 36.39 temperature 10.0 10 > th dose independent rect. 12 6
264 36.39 atmosphere 1015.0 10 < th dose independent rect. 12 6
266 36.39 temperature 10.0 10 > th dose independent rect. 18 18
274 36.40 atmosphere 995.0 10 > th dose independent rect. 18 18
287 36.44 wind 9.0 10 < th dose independent rect. 12 6
289 36.45 radiation 40.0 270 > th dose independent rect. 12 2
290 36.45 humidity 90.0 270 < th dose independent rect. 11 4
294 36.45 precipitation 0.1 10 < th dose independent rect. 12 6
299 36.45 precipitation 0.1 10 < th dose dependent rect. 12 6
317 36.46 atmosphere 1015.0 10 < th dose independent rect. 18 18
323 36.47 humidity 50.0 270 > th dose independent rect. 10 6
348 36.54 temperature 10.0 30 > th dose dependent rect. 18 18
364 36.57 temperature 10.0 270 > th dose independent rect. 10 6
365 36.57 atmosphere 1015.0 270 < th dose independent rect. 10 6
368 36.58 wind 5.0 90 > th dose independent sin 20 NA
373 36.59 precipitation 0.1 270 < th dose independent rect. 10 6
376 36.59 precipitation 0.1 270 < th dose dependent rect. 10 6
379 36.60 humidity 50.0 90 > th dose independent rect. 17 19
386 36.62 wind 9.0 270 < th dose independent rect. 10 6
413 36.67 atmosphere 995.0 10 > th dose independent rect. 12 6
421 36.68 wind 1.0 90 > th dose dependent rect. 2 15
425 36.69 temperature 10.0 1440 > th dose independent rect. 13 6
430 36.69 temperature 10.0 1440 > th dose independent rect. 19 18
433 36.69 atmosphere 995.0 1440 > th dose independent rect. 19 18
439 36.70 wind 5.0 90 > th dose independent rect. 1 17
440 36.70 wind 5.0 90 > th dose independent rect. 21 21
459 36.72 radiation 1.0 270 > th dose independent rect. 11 4
462 36.72 atmosphere 1015.0 270 < th dose independent rect. 15 20
477 36.75 radiation 1.0 270 < th dose independent rect. 20 10
480 36.76 wind 5.0 90 < th dose independent rect. 6 15
482 36.76 wind 5.0 90 > th dose independent rect. 23 19
483 36.76 wind 5.0 90 < th dose independent rect. 13 23
488 36.77 atmosphere 995.0 270 > th dose independent rect. 10 6
494 36.78 radiation 1.0 270 > th dose independent rect. 15 21
524 36.83 wind 9.0 90 < th dose independent rect. 5 7
526 36.83 precipitation 0.1 90 < th dose independent rect. 5 7
535 36.83 precipitation 0.1 90 < th dose dependent rect. 5 7
545 36.85 atmosphere 1000.0 270 > th dose independent rect. 15 8
559 36.86 temperature 25.0 90 < th dose independent rect. 11 19
567 36.87 temperature 10.0 90 > th dose independent rect. 5 7
568 36.87 atmosphere 995.0 90 > th dose independent rect. 5 7
569 36.87 atmosphere 1015.0 90 < th dose independent rect. 5 7
572 36.87 temperature 10.0 90 > th dose independent rect. 12 17
596 36.90 radiation 20.0 270 > th dose dependent rect. 12 3
622 36.93 radiation 1.0 270 > th dose dependent rect. 12 3
644 36.98 wind 9.0 10 < th dose independent rect. 6 6
645 36.98 wind 9.0 90 < th dose independent rect. 12 17
667 37.00 temperature 25.0 10 < th dose independent rect. 12 19
695 37.03 temperature 10.0 10 > th dose independent rect. 6 6
697 37.03 atmosphere 995.0 10 > th dose independent rect. 6 6
698 37.03 atmosphere 1015.0 10 < th dose independent rect. 6 6
699 37.03 precipitation 0.1 10 < th dose independent rect. 6 6
700 37.03 atmosphere 1015.0 270 < th dose independent rect. 15 8
702 37.03 temperature 10.0 10 > th dose independent rect. 12 18
706 37.03 precipitation 0.1 10 < th dose dependent rect. 6 6
727 37.06 precipitation 0.1 270 < th dose independent rect. 15 8
733 37.06 precipitation 0.1 270 < th dose dependent rect. 15 8
735 37.06 wind 9.0 270 < th dose dependent rect. 15 20
739 37.07 wind 1.0 10 > th dose independent rect. 6 6
766 37.09 radiation 30.0 270 < th dose independent rect. 14 9
797 37.11 humidity 50.0 270 > th dose independent rect. 23 16
808 37.12 atmosphere 1015.0 10 < th dose dependent rect. 6 6
830 37.13 humidity 50.0 10 > th dose independent rect. 12 18
834 37.13 radiation 10.0 270 < th dose dependent rect. 20 10
838 37.14 temperature 25.0 90 > th dose independent sin 11 NA
845 37.15 temperature 10.0 1440 > th dose independent rect. 7 6
848 37.15 atmosphere 995.0 1440 > th dose independent rect. 7 6
850 37.15 temperature 10.0 1440 > th dose independent rect. 13 18
859 37.16 atmosphere 1015.0 90 < th dose independent rect. 17 8
860 37.16 precipitation 0.1 270 < th dose independent rect. 3 8
865 37.16 precipitation 0.1 270 < th dose dependent rect. 3 8
867 37.17 temperature 10.0 270 > th dose independent rect. 15 8
868 37.17 temperature 10.0 270 > th dose independent rect. 23 16
876 37.17 humidity 50.0 10 > th dose dependent rect. 12 5
881 37.18 humidity 50.0 90 > th dose independent rect. 5 7
884 37.18 wind 9.0 10 < th dose independent rect. 12 18
900 37.20 wind 1.0 90 > th dose independent rect. 5 7
905 37.20 precipitation 0.1 90 < th dose independent rect. 12 17
907 37.20 precipitation 0.1 90 < th dose dependent rect. 12 17
918 37.22 radiation 1.0 270 > th dose independent rect. 10 6
922 37.22 wind 9.0 270 < th dose independent rect. 23 16
924 37.22 wind 5.0 90 > th dose independent rect. 1 22
925 37.22 wind 5.0 90 < th dose independent rect. 4 23
934 37.23 precipitation 0.1 270 < th dose independent rect. 15 10
937 37.23 atmosphere 995.0 90 > th dose independent rect. 12 17
939 37.23 humidity 50.0 90 > th dose dependent rect. 12 5
940 37.23 precipitation 0.1 270 < th dose dependent rect. 15 10
943 37.24 wind 9.0 270 < th dose independent rect. 15 8
945 37.24 atmosphere 995.0 270 > th dose independent rect. 23 16
962 37.25 humidity 50.0 270 > th dose independent rect. 15 20
969 37.26 temperature 10.0 270 > th dose independent rect. 15 10
970 37.26 temperature 10.0 270 > th dose independent rect. 1 14
971 37.26 atmosphere 1015.0 270 < th dose independent rect. 1 14