BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0192800 Os08g0192800|AK120613
(481 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591 118 7e-27
AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488 115 7e-26
AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621 112 6e-25
AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462 111 7e-25
AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679 105 4e-23
AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690 103 2e-22
AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767 98 1e-20
AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814 96 3e-20
AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062 89 5e-18
AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387 86 3e-17
AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495 79 8e-15
AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917 63 4e-10
AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581 62 6e-10
AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653 62 6e-10
AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387 61 2e-09
AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583 55 7e-08
>AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591
Length = 590
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 73/117 (62%)
Query: 133 LQAAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGR 192
L A M C+QIL +L K K + FN+PVDV L LHDYH +++ PMDLGTVK NL G
Sbjct: 165 LLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGF 224
Query: 193 YPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRL 249
Y S FATDVRLTF NA+ YNP V+ A LL F+G++ A FE + +L
Sbjct: 225 YVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKL 281
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 20/156 (12%)
Query: 288 EPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETL 347
+PNKR M+ EEK KL + + +LP EK+G +LQI++KRN A G+ +ELD + +D ETL
Sbjct: 398 DPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETL 457
Query: 348 WELDRFVVNCKKALSKSRRTVAMNGDAVDATAIVPTEDDTVQVNVHHQPSVVEIGDSEND 407
WELDRFV N KK SK +R + V + SV E+G +
Sbjct: 458 WELDRFVTNYKKMASKIKRQGFIR---------------NVSTPPRNMASVAEMGSA--- 499
Query: 408 TPEKRVSEVDMVDEYVDIGDEMPTANYQSVEIERDA 443
EKR D +E VDIG+++P +Y SVEIERD
Sbjct: 500 --EKRTRRGDAGEEDVDIGEDIPIEDYPSVEIERDG 533
>AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488
Length = 487
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 61 VAPSVPDPSPSGH--VTIRPSELSRREAQVLRARLTGELSRVRALLSDID---------- 108
V+PS S H + I S +S+ E + L+ +L EL VR+L+ D
Sbjct: 41 VSPSNSFASEDDHHMLKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMA 100
Query: 109 -----GWXXXXXXXXXXXXQRGHVSPPPALQAAMRKRCTQILTRLRKQKISVWFNSPVDV 163
G + GH + +Q + K C +LT+L K K + FN PVD
Sbjct: 101 KSGVVGRSKKVKTGNGGGKKSGHGADKGTVQ--IFKNCNSLLTKLMKHKSAWVFNVPVDA 158
Query: 164 ERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRY 223
+ L LHDYH I++ PMDLGTVK L Y S FA DVRLTF+NA+ YNP H V+R+
Sbjct: 159 KGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRF 218
Query: 224 ASNLLATFE 232
A LL FE
Sbjct: 219 AELLLNMFE 227
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%)
Query: 290 NKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWE 349
N R+++ EEK +L E+ +LP +K+ V+QI++K N + + + +ELD D +D+ TLWE
Sbjct: 326 NNRDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWE 385
Query: 350 LDRFVVNCKKALSK 363
L RFV K++LSK
Sbjct: 386 LYRFVTGYKESLSK 399
>AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621
Length = 620
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 47/325 (14%)
Query: 129 PPPALQAAM--RKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKE 186
P P + M K+C +L RL Q+ FN+PVDV +L + DY II++PMDLGTVK
Sbjct: 119 PEPVTTSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKS 178
Query: 187 NLAFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQEC 246
L G Y S F+ DVRLTF NA+ YNP+D++V+R+A L FE + W E
Sbjct: 179 KLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFE------VRWKTIEK 232
Query: 247 QRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPNKREMSDEEKHKLRVEI 306
+ EP KR M+DE++ KL ++
Sbjct: 233 KSSGTKSEPSNLATLAHKDIAIPEPVAKKRKMNAVKRNSLLEPAKRVMTDEDRVKLGRDL 292
Query: 307 GNLPEEKMGNVLQIVQKRNTDPALMG-EVVELDFDEMDVETLWEL----DRFVVNCKKAL 361
G+L E + ++ ++ ++ G + +E+D +++ + L++L D F+ +K
Sbjct: 293 GSLTEFPV-QIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQKKD 351
Query: 362 SKSRRTVAMNGDAVDATAIVPTEDDTVQVNVHHQPSVVEI--GDSENDTPEKRVSEVDMV 419
S NG +P V+E+ G ++ + ++
Sbjct: 352 S--------NG----------------------EPCVLELLHGSGPGNSLTQHCDGSELE 381
Query: 420 DEYVDIGD-EMPTANYQSVEIERDA 443
DE VDIG+ E P ++ +V E+D+
Sbjct: 382 DEDVDIGNYEHPISHISTVRTEKDS 406
>AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462
Length = 461
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 74 VTIRPSELSRREAQVLRARLTGELSRVRALLSDIDGWXXX------XXXXXXXXXQRGHV 127
+ I S +S+ E + L+ +L EL VR+L+ ++ ++G V
Sbjct: 48 MKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTANGGKKGGV 107
Query: 128 SPPPALQAAMR--KRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVK 185
A + ++ K C +LT+L K K FN+PVDV L LHDYH II+ PMDLGTVK
Sbjct: 108 HGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVK 167
Query: 186 ENLAFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFE 232
L+ Y S FA DVRLTF+NA+ YNP H V+ A LL FE
Sbjct: 168 TRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFE 214
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 55/82 (67%)
Query: 292 REMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELD 351
R+++ +EK +L ++ +LP +K+ V+QI++KR + + + +ELD D +D+ETLWEL
Sbjct: 306 RDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELF 365
Query: 352 RFVVNCKKALSKSRRTVAMNGD 373
RFV K++LSK + ++ +
Sbjct: 366 RFVTEYKESLSKKKEEQGLDSE 387
>AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679
Length = 678
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 67/110 (60%)
Query: 136 AMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPS 195
+M C QIL +L K K S F +PVDV L LHDYH I+ PMDLGTVK NL G Y S
Sbjct: 248 SMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRS 307
Query: 196 HEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQE 245
FA+DVRLTF+NA+ YNP V+ A LL+ F+ + L FE +
Sbjct: 308 PIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQ 357
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 19/154 (12%)
Query: 288 EPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETL 347
+PNKREM+ +EK KL V + LP EK+G ++QI++KR D G+ +ELD + +D ETL
Sbjct: 468 DPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETL 527
Query: 348 WELDRFVVNCKKALSKSRRTVAMNGDAVDATAIVPTEDDTVQVNVHHQPSVVEIGDSEND 407
WELDRFV N +K SK +R + V + P V E+G +E
Sbjct: 528 WELDRFVTNYRKMASKIKRQGFIQ---------------NVSTPPRNMPPVTEMGSAEKR 572
Query: 408 TPEKRVSEVDMVDEYVDIGDEMPTANYQSVEIER 441
++ E +E VDIG+++P +Y SVEIER
Sbjct: 573 G--RKGGEAG--EEDVDIGEDIPVEDYPSVEIER 602
>AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690
Length = 689
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 33/318 (10%)
Query: 129 PPPALQAAM--RKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKE 186
P P A M K+C +L RL + FN+PVDV +L + DY +I +PMDLGTVK
Sbjct: 127 PTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKN 186
Query: 187 NLAFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQEC 246
L G Y FA DVRLTFSNA+ YNP + V+ A L FE +K E++
Sbjct: 187 KLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWK----TLEKKL 242
Query: 247 QRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPNKREMSDEEKHKLRVEI 306
+ +P KR M+DE++ KL ++
Sbjct: 243 SGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDEDRLKLGKDL 302
Query: 307 GNLPEEKMGNVLQIVQKRNTDPALMG-EVVELDFDEMDVETLWELDRFVVNCKKALSKSR 365
+L E ++ ++ N++ +G + +E+D +++ L++L + L +
Sbjct: 303 ESLTEFP-AQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQL-------RDLLDEHL 354
Query: 366 RTVAMNGDAVDATAIVPTEDDTVQVNVHHQPSVVEIGDSENDTPEKRVSEVDMVDEYVDI 425
R + +V+ P E + + +V S+ SE D DE VDI
Sbjct: 355 REIQNKKSSVE-----PCEIELLHGSVPGNSSMQHCDGSELD------------DEVVDI 397
Query: 426 G-DEMPTANYQSVEIERD 442
G +E PT++ V IE+D
Sbjct: 398 GENEHPTSSISPVTIEKD 415
>AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767
Length = 766
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 57/94 (60%)
Query: 139 KRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEA 198
K C+ +L RL K K FN+PVDV+ L L DY+ II +PMDLGT+K L Y S
Sbjct: 423 KNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPRE 482
Query: 199 FATDVRLTFSNALRYNPADHHVHRYASNLLATFE 232
FA DVRLTF NA+ YNP VH A LL FE
Sbjct: 483 FAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFE 516
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 288 EPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETL 347
EPNKR+M+ EEK KL + NLP +K+ ++QIV KRNT L E +E+D D +D ETL
Sbjct: 601 EPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETL 660
Query: 348 WELDRFVVN 356
WELDRFV N
Sbjct: 661 WELDRFVTN 669
>AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814
Length = 813
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%)
Query: 137 MRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSH 196
+ K+C +L +L S F +PVDV +L + DY I++PMDLGTVK+NLA G Y S
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 197 EAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYK 236
FA DVRLTF+NA+ YNP H VH L FE +K
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWK 275
>AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062
Length = 1061
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%)
Query: 135 AAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYP 194
A++ K C +L RL K F +PVD L + DY +I++PMDLGT++ L G Y
Sbjct: 159 ASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYS 218
Query: 195 SHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYK 236
S FA DVRLTFSN++ YNP + H A + FE +K
Sbjct: 219 SPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWK 260
>AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387
Length = 386
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 98/250 (39%), Gaps = 21/250 (8%)
Query: 126 HVSPPPALQAAMRKRCTQILTRLRKQKISVW---FNSPVDVERLKLHDYHAIIRNPMDLG 182
HVS P ++ Q T R+ W F PVDV+ L LHDY+ +I PMDLG
Sbjct: 104 HVSSPDLMR--------QFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLG 155
Query: 183 TVKENLAFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFE--------GL 234
T+K+ + Y + DVRL F NA+RYN V+ A +LL FE L
Sbjct: 156 TIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKL 215
Query: 235 YKEALSWFEQECQRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPNKREM 294
+E ++E ++ K +
Sbjct: 216 VEEEKKQVDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRK--L 273
Query: 295 SDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFV 354
S +EK L +G L E + L++V + N VELD D TLW L FV
Sbjct: 274 STQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFV 333
Query: 355 VNCKKALSKS 364
KA +KS
Sbjct: 334 QEALKAANKS 343
>AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495
Length = 494
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 140 RCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAF 199
+C +L L + + F PVD ++++ DY +I+ PMDLGTVK L Y + + F
Sbjct: 72 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 131
Query: 200 ATDVRLTFSNALRYNPADHHVHRYASNLLATF----EGLYKEA---LSWFE 243
A DVRLTF+NA+ YNP + VH A + F E L K+ LSW E
Sbjct: 132 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKKKVLRLSWNE 182
>AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917
Length = 916
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 138 RKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHE 197
+K IL +L+K+ I + PVD E +L DYH +I +PMD TV++ LA G Y + E
Sbjct: 188 KKSLELILDKLQKKDIYGVYAEPVDPE--ELPDYHDMIEHPMDFSTVRKKLANGSYSTLE 245
Query: 198 AFATDVRLTFSNALRYNPADHHVHRYASNL 227
+DV L SNA++YN +D ++ A +
Sbjct: 246 ELESDVLLICSNAMQYNSSDTVYYKQARTI 275
>AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581
Length = 580
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 144 ILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDV 203
IL R++K+ ++ P D E L DY+ II+NPMD T+++ L G Y + E F DV
Sbjct: 153 ILDRVQKKDTYGVYSDPADPEELP--DYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDV 210
Query: 204 RLTFSNALRYNPADHHVHRYASNLL 228
L +NA+ YN AD +R A +L
Sbjct: 211 FLICTNAMEYNSADTVYYRQARAML 235
>AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653
Length = 652
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 144 ILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDV 203
IL RL+K+ ++ PVD E L DY II+NPMD T++ L G Y + E F DV
Sbjct: 183 ILDRLQKKDTYGVYSDPVDPEELP--DYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDV 240
Query: 204 RLTFSNALRYNPADHHVHRYA 224
L +NA+ YN AD +R A
Sbjct: 241 FLICTNAMEYNSADTVYYRQA 261
>AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387
Length = 386
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 133 LQAAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENL---- 188
+Q MR+ T I ++ + K + F PV+VE L LHDY +I PMD T+K +
Sbjct: 108 MQDLMRQFGT-IFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKD 166
Query: 189 AFGRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFE 232
G + +A D+RL F NA+ YN V+ A LL FE
Sbjct: 167 GTGYKHVMQIYA-DMRLVFENAMNYNEETSDVYSMAKKLLEKFE 209
>AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583
Length = 582
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 144 ILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFG-RYPSHEAFATD 202
++ ++ K + + FN PV+ E L + DY II+ PMD GT+ N G +Y + E D
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKD 281
Query: 203 VRLTFSNALRYNPADHHV----HRYASNLLA--TFEGLYKE 237
V ++N +YN ++ R N + T GLY E
Sbjct: 282 VNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTSAGLYTE 322
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,968,522
Number of extensions: 288346
Number of successful extensions: 848
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 846
Number of HSP's successfully gapped: 21
Length of query: 481
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 379
Effective length of database: 8,310,137
Effective search space: 3149541923
Effective search space used: 3149541923
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)