Os08g0180100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Enhancer of zeste homolog 2 (ENX-1).
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Os08g0180100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Enhancer of zeste homolog 2 (ENX-1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.8 | 0.187 | 10.9 | 0.944 | 0.199 | 0.221 | -0.00328 | -0.39 | 0.166 | 7.58 | 24.4 | 263 | -- | -- |
| 16.39 | 0.189 | 11 | 0.85 | 0.205 | 0.207 | -0.095 | -- | 0.115 | 6.94 | 24.37 | 281 | -- | -- |
| 15.79 | 0.185 | 10.9 | 0.951 | 0.209 | 0.215 | -- | -0.397 | 0.16 | 7.44 | 24.2 | 259 | -- | -- |
| 16.32 | 0.188 | 11 | 0.811 | 0.206 | 0.201 | -- | -- | 0.122 | 7.47 | 24.35 | 269 | -- | -- |
| 16.66 | 0.19 | 10.9 | 0.993 | -- | 0.324 | -- | -0.587 | 0.208 | -- | 25.27 | 404 | -- | -- |
| 18.56 | 0.202 | 11 | 0.742 | 0.284 | -- | -0.116 | -- | 0.0236 | 6.65 | -- | -- | -- | -- |
| 18.59 | 0.202 | 11 | 0.74 | 0.284 | -- | -- | -- | 0.024 | 6.69 | -- | -- | -- | -- |
| 17.42 | 0.194 | 11 | 0.821 | -- | 0.293 | -- | -- | 0.147 | -- | 25.2 | 394 | -- | -- |
| 32.73 | 0.266 | 11 | -- | 0.259 | 0.0793 | -- | -- | 0.00794 | 6.82 | 24.24 | 91 | -- | -- |
| 22.8 | 0.223 | 11 | 0.747 | -- | -- | -- | -- | 0.0296 | -- | -- | -- | -- | -- |
| 33.04 | 0.269 | 11 | -- | 0.293 | -- | -- | -- | -0.0585 | 6.54 | -- | -- | -- | -- |
| 34.83 | 0.275 | 11 | -- | -- | 0.199 | -- | -- | 0.0247 | -- | 25.47 | 358 | -- | -- |
| 37.52 | 0.286 | 11 | -- | -- | -- | -- | -- | -0.0532 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 5 | 15.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 8 | 15.33 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 11 | 15.36 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 21 |
| 16 | 15.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 60 | 15.62 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 69 | 15.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 71 | 15.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 73 | 15.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 90 | 15.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 113 | 15.78 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 19 |
| 119 | 15.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 173 | 15.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 181 | 15.94 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 182 | 15.94 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 189 | 15.96 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 196 | 15.97 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 199 | 15.97 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 208 | 15.99 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 213 | 15.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 214 | 16.00 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 231 | 16.01 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 232 | 16.01 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 22 |
| 233 | 16.01 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 247 | 16.02 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 265 | 16.03 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 266 | 16.03 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 303 | 16.05 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 326 | 16.06 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 364 | 16.07 | radiation | 20 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 400 | 16.08 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 416 | 16.09 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 6 | NA |
| 439 | 16.09 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 440 | 16.09 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 508 | 16.11 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 509 | 16.11 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 518 | 16.11 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 10 |
| 583 | 16.12 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 2 | NA |
| 613 | 16.13 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 635 | 16.13 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 0 | NA |
| 675 | 16.14 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 7 | NA |
| 679 | 16.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 740 | 16.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 741 | 16.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 826 | 16.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 872 | 16.16 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 8 |
| 881 | 16.16 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 976 | 16.17 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 12 | 18 |