BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0180100 Os08g0180100|AK121489
(494 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15180.1 | chr4:8651999-8662178 FORWARD LENGTH=2336 728 0.0
AT2G44150.1 | chr2:18258863-18261003 FORWARD LENGTH=364 63 3e-10
AT3G59960.1 | chr3:22148334-22150386 FORWARD LENGTH=353 62 5e-10
AT1G77300.1 | chr1:29040160-29048810 REVERSE LENGTH=1806 62 6e-10
AT4G30860.1 | chr4:15024546-15027427 FORWARD LENGTH=498 57 2e-08
AT1G05830.1 | chr1:1754452-1761225 FORWARD LENGTH=1084 56 6e-08
AT5G42400.1 | chr5:16954469-16960671 REVERSE LENGTH=1424 53 3e-07
AT4G27910.1 | chr4:13894694-13900256 FORWARD LENGTH=1028 53 5e-07
AT2G31650.1 | chr2:13455448-13462181 REVERSE LENGTH=1063 52 8e-07
AT1G02580.1 | chr1:544796-548994 FORWARD LENGTH=690 52 1e-06
AT5G53430.1 | chr5:21677623-21683166 FORWARD LENGTH=1044 51 2e-06
AT1G76710.1 | chr1:28789887-28792371 REVERSE LENGTH=493 49 4e-06
AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019 48 9e-06
>AT4G15180.1 | chr4:8651999-8662178 FORWARD LENGTH=2336
Length = 2335
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/493 (70%), Positives = 415/493 (84%), Gaps = 2/493 (0%)
Query: 2 LERPKGDRDGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEG 61
LERPKGD DGYDLV VDAMH ANYASRICHSC PNCEAKVTAVDGHYQIGIY+VR I G
Sbjct: 1837 LERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRAIEYG 1896
Query: 62 EEITFDYNSVTESKEEHEASVCLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLDRHSLLL 121
EEITFDYNSVTESKEE+EASVCLCGSQ+CRGSYLN +GEGAF+KVL ++HG+L+RH L+L
Sbjct: 1897 EEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDWHGLLERHRLML 1956
Query: 122 QACEANSVSQQDLIDLGRAGLGTCLLAGLPGWLVAYTAHLVRFIFFERQKLPHEIFKHNV 181
+AC NSVS++D ++LGRAGLG+CLL GLP W++AY+A LVRFI FER KLP EI KHN+
Sbjct: 1957 EACVLNSVSEEDYLELGRAGLGSCLLGGLPDWMIAYSARLVRFINFERTKLPEEILKHNL 2016
Query: 182 DEKRQFFTDINMDSEKNDAEVQAEGVLNSRLQNLTHTLDKVRYVMRCIFGDPKNAPPPLV 241
+EKR++F+DI++D EK+DAEVQAEGV N RLQNL TLDKVRYVMR +FGDPKNAPPPL
Sbjct: 2017 EEKRKYFSDIHLDVEKSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRHVFGDPKNAPPPLE 2076
Query: 242 RLTGRSLVSAIWKGEGSLVDELLESMEPHVEEDVLTDLKAKIRAHDPSGSEDIEGEIRSS 301
RLT VS +W G+GSLVDELL+S+ PH+EE L +L++KI HDPSGS D+ E++ S
Sbjct: 2077 RLTPEETVSFVWNGDGSLVDELLQSLSPHLEEGPLNELRSKIHGHDPSGSADVLKELQRS 2136
Query: 302 LLWLRDELRTLSCTYKCRHDAAADLIHMYAYTKCFFRVRDYKTVKSPPVLISPLDLGPKY 361
LLWLRDE+R L CTYKCR+DAAADLIH+YAYTKCFF+VR+Y++ S PV ISPLDLG KY
Sbjct: 2137 LLWLRDEIRDLPCTYKCRNDAAADLIHIYAYTKCFFKVREYQSFISSPVHISPLDLGAKY 2196
Query: 362 ADKLGPGFQEYCKTYPENYCLGQLIYWYSQ-NAEPESRLTRARKGCMSLPDVSSFYVKSV 420
ADKLG +EY KTY ENYCLGQLIYWY+Q N +P+ L +A +GC+SLPDV+SFY K+
Sbjct: 2197 ADKLGESIKEYRKTYGENYCLGQLIYWYNQTNTDPDLTLVKATRGCLSLPDVASFYAKAQ 2256
Query: 421 KPTQERVYGSRTVRFMLARMENQAQRPWPKDRIWVFKSDPRFFGTPMMDAVLNN-SPLDK 479
KP++ RVYG +TV+ M+++M Q QRPWPKD+IW FKS PR FG+PM DAVLNN S LD+
Sbjct: 2257 KPSKHRVYGPKTVKTMVSQMSKQPQRPWPKDKIWTFKSTPRVFGSPMFDAVLNNSSSLDR 2316
Query: 480 EMVHWLKTRSNVF 492
E++ WL+ R +VF
Sbjct: 2317 ELLQWLRNRRHVF 2329
>AT2G44150.1 | chr2:18258863-18261003 FORWARD LENGTH=364
Length = 363
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 13 DLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVT 72
D+V +DA HK N + I HSCNPN + + +DG +IGI+ R I +GE +T+DY V
Sbjct: 178 DMV-IDATHKGNKSRYINHSCNPNTQMQKWIIDGETRIGIFATRGIKKGEHLTYDYQFVQ 236
Query: 73 ESKEEHEASVCLCGSQICRG------SYLNFSGEGAFEKVLMEF---------HGVLDRH 117
++ C CG+ CR S + + AF V E +G+++RH
Sbjct: 237 FGADQD----CHCGAVGCRRKLGVKPSKPKIASDEAFNLVAHELAQTLPKVHQNGLVNRH 292
Query: 118 SLLLQACEANSVSQQD 133
+ N++SQ+D
Sbjct: 293 --IDAGKSWNNLSQRD 306
>AT3G59960.1 | chr3:22148334-22150386 FORWARD LENGTH=353
Length = 352
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 15 VFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVTES 74
+ +DA HK N + I HSC+PN E + +DG +IGI+ R I +GE++T+DY V
Sbjct: 174 MVIDATHKGNKSRYINHSCSPNTEMQKWIIDGETRIGIFATRFINKGEQLTYDYQFVQFG 233
Query: 75 KEEHEASVCLCGSQICR 91
++ C CG+ CR
Sbjct: 234 ADQD----CYCGAVCCR 246
>AT1G77300.1 | chr1:29040160-29048810 REVERSE LENGTH=1806
Length = 1805
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 17 VDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVTESKE 76
+DA K N I HSC PNC + V+G +GI++++ + +G+E+TFDYN V
Sbjct: 1091 IDAGAKGNLGRFINHSCEPNCRTEKWMVNGEICVGIFSMQDLKKGQELTFDYNYVRVFG- 1149
Query: 77 EHEASVCLCGSQICRG 92
A C CGS CRG
Sbjct: 1150 -AAAKKCYCGSSHCRG 1164
>AT4G30860.1 | chr4:15024546-15027427 FORWARD LENGTH=498
Length = 497
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 17 VDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVTESKE 76
+DA K N + + HSCNPNC + V+G ++G++ R I GE +T+DY V E
Sbjct: 391 IDATFKGNASRFLNHSCNPNCVLEKWQVEGETRVGVFAARQIEAGEPLTYDYRFVQFGPE 450
Query: 77 EHEASVCLCGSQICRG 92
C CGS+ C+G
Sbjct: 451 VK----CNCGSENCQG 462
>AT1G05830.1 | chr1:1754452-1761225 FORWARD LENGTH=1084
Length = 1083
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 17 VDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVTESKE 76
+DA + A I HSC PNC ++V +V+G I I+ R +A+ EE+T+DY +
Sbjct: 985 IDATRTGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDVAKWEELTYDYRFFSID-- 1042
Query: 77 EHEASVCLCGSQICRG 92
E C CG CRG
Sbjct: 1043 --ERLACYCGFPRCRG 1056
>AT5G42400.1 | chr5:16954469-16960671 REVERSE LENGTH=1424
Length = 1423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 10 DGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDY 68
DGY +DA + A I HSC PNC K+ +V+G +I IY R I GEEI+++Y
Sbjct: 1327 DGY---VLDATKRGGIARFINHSCEPNCYTKIISVEGKKKIFIYAKRHIDAGEEISYNY 1382
>AT4G27910.1 | chr4:13894694-13900256 FORWARD LENGTH=1028
Length = 1027
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 15 VFVDAMHKANYASRICHSCNPNCEAKVTAV-DGHYQIGIYTVRPIAEGEEITFDYNSVTE 73
V VDA K N A I HSC PNC A++ +V D +I + +A GEE+T+DY + +
Sbjct: 947 VVVDATDKGNIARLINHSCTPNCYARIMSVGDEESRIVLIAKANVAVGEELTYDY--LFD 1004
Query: 74 SKEEHEASV-CLCGSQICR 91
E E V CLC + CR
Sbjct: 1005 PDEAEELKVPCLCKAPNCR 1023
>AT2G31650.1 | chr2:13455448-13462181 REVERSE LENGTH=1063
Length = 1062
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 13 DLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVT 72
D +DA + A I HSC PNC ++V V+G I I+ R I + EE+T+DY +
Sbjct: 960 DERVIDATRTGSIAHLINHSCVPNCYSRVITVNGDEHIIIFAKRHIPKWEELTYDYRFFS 1019
Query: 73 ESKEEHEASVCLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLD 115
E C CG CRG + E K+ + ++D
Sbjct: 1020 IG----ERLSCSCGFPGCRGVVNDTEAEEQHAKICVPRCDLID 1058
>AT1G02580.1 | chr1:544796-548994 FORWARD LENGTH=690
Length = 689
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 13 DLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDY 68
D + +DA K N + HS PNC AK+ V G +IG++ R I EGEE+ FDY
Sbjct: 603 DQLEIDARRKGNEFKFLNHSARPNCYAKLMIVRGDQRIGLFAERAIEEGEELFFDY 658
>AT5G53430.1 | chr5:21677623-21683166 FORWARD LENGTH=1044
Length = 1043
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 15 VFVDAMHKANYASRICHSCNPNCEAKVTAV-DGHYQIGIYTVRPIAEGEEITFDYNSVTE 73
V VDA K N A I HSC PNC A++ +V D +I + +A EE+T+DY + +
Sbjct: 963 VVVDATEKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTTVASCEELTYDY--LFD 1020
Query: 74 SKEEHEASV-CLCGSQICR 91
E E V CLC S CR
Sbjct: 1021 PDEPDEFKVPCLCKSPNCR 1039
>AT1G76710.1 | chr1:28789887-28792371 REVERSE LENGTH=493
Length = 492
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 7 GDRDGYDLVF-----VDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEG 61
G +D Y + +DA K + A I HSC PNCE + V G ++GI+ I+
Sbjct: 139 GVKDAYIISLNASEAIDATKKGSLARFINHSCRPNCETRKWNVLGEVRVGIFAKESISPR 198
Query: 62 EEITFDYNSVTESKEEHEASV-CLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLDRHSL 119
E+ +DYN A V CLCG+ C G +L G F++ + DR+S+
Sbjct: 199 TELAYDYNFEWYGG----AKVRCLCGAVACSG-FLGAKSRG-FQEDTYVWEDGDDRYSV 251
>AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019
Length = 1018
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 15 VFVDAMHKANYASRICHSCNPNCEAKVTAV-DGH-YQIGIYTVRPIAEGEEITFDYNSVT 72
+ +DA N A I HSC PNC A++ ++ DG +I + +A GEE+T+DY +
Sbjct: 937 IVIDATDSGNIARLINHSCMPNCYARIVSMGDGEDNRIVLIAKTNVAAGEELTYDY--LF 994
Query: 73 ESKEEHEASV-CLCGSQICR 91
E E E V CLC + CR
Sbjct: 995 EVDESEEIKVPCLCKAPNCR 1014
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,469,576
Number of extensions: 495917
Number of successful extensions: 1088
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 1095
Number of HSP's successfully gapped: 13
Length of query: 494
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 391
Effective length of database: 8,282,721
Effective search space: 3238543911
Effective search space used: 3238543911
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)