BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0180100 Os08g0180100|AK121489
         (494 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os08g0180100  Similar to Enhancer of zeste homolog 2 (ENX-1)     1036   0.0  
Os12g0613200  Similar to Histone-lysine N-methyltransferase,...    68   2e-11
Os02g0554000  Zinc finger, CW-type domain containing protein       67   2e-11

>Os08g0180100 Similar to Enhancer of zeste homolog 2 (ENX-1)
          Length = 494

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/494 (100%), Positives = 494/494 (100%)

Query: 1   MLERPKGDRDGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAE 60
           MLERPKGDRDGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAE
Sbjct: 1   MLERPKGDRDGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAE 60

Query: 61  GEEITFDYNSVTESKEEHEASVCLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLDRHSLL 120
           GEEITFDYNSVTESKEEHEASVCLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLDRHSLL
Sbjct: 61  GEEITFDYNSVTESKEEHEASVCLCGSQICRGSYLNFSGEGAFEKVLMEFHGVLDRHSLL 120

Query: 121 LQACEANSVSQQDLIDLGRAGLGTCLLAGLPGWLVAYTAHLVRFIFFERQKLPHEIFKHN 180
           LQACEANSVSQQDLIDLGRAGLGTCLLAGLPGWLVAYTAHLVRFIFFERQKLPHEIFKHN
Sbjct: 121 LQACEANSVSQQDLIDLGRAGLGTCLLAGLPGWLVAYTAHLVRFIFFERQKLPHEIFKHN 180

Query: 181 VDEKRQFFTDINMDSEKNDAEVQAEGVLNSRLQNLTHTLDKVRYVMRCIFGDPKNAPPPL 240
           VDEKRQFFTDINMDSEKNDAEVQAEGVLNSRLQNLTHTLDKVRYVMRCIFGDPKNAPPPL
Sbjct: 181 VDEKRQFFTDINMDSEKNDAEVQAEGVLNSRLQNLTHTLDKVRYVMRCIFGDPKNAPPPL 240

Query: 241 VRLTGRSLVSAIWKGEGSLVDELLESMEPHVEEDVLTDLKAKIRAHDPSGSEDIEGEIRS 300
           VRLTGRSLVSAIWKGEGSLVDELLESMEPHVEEDVLTDLKAKIRAHDPSGSEDIEGEIRS
Sbjct: 241 VRLTGRSLVSAIWKGEGSLVDELLESMEPHVEEDVLTDLKAKIRAHDPSGSEDIEGEIRS 300

Query: 301 SLLWLRDELRTLSCTYKCRHDAAADLIHMYAYTKCFFRVRDYKTVKSPPVLISPLDLGPK 360
           SLLWLRDELRTLSCTYKCRHDAAADLIHMYAYTKCFFRVRDYKTVKSPPVLISPLDLGPK
Sbjct: 301 SLLWLRDELRTLSCTYKCRHDAAADLIHMYAYTKCFFRVRDYKTVKSPPVLISPLDLGPK 360

Query: 361 YADKLGPGFQEYCKTYPENYCLGQLIYWYSQNAEPESRLTRARKGCMSLPDVSSFYVKSV 420
           YADKLGPGFQEYCKTYPENYCLGQLIYWYSQNAEPESRLTRARKGCMSLPDVSSFYVKSV
Sbjct: 361 YADKLGPGFQEYCKTYPENYCLGQLIYWYSQNAEPESRLTRARKGCMSLPDVSSFYVKSV 420

Query: 421 KPTQERVYGSRTVRFMLARMENQAQRPWPKDRIWVFKSDPRFFGTPMMDAVLNNSPLDKE 480
           KPTQERVYGSRTVRFMLARMENQAQRPWPKDRIWVFKSDPRFFGTPMMDAVLNNSPLDKE
Sbjct: 421 KPTQERVYGSRTVRFMLARMENQAQRPWPKDRIWVFKSDPRFFGTPMMDAVLNNSPLDKE 480

Query: 481 MVHWLKTRSNVFLG 494
           MVHWLKTRSNVFLG
Sbjct: 481 MVHWLKTRSNVFLG 494



>Os12g0613200 Similar to Histone-lysine N-methyltransferase, H3 lysine-4 specific
            SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
            complex subunit SET1) (SET-domain-containing protein 1)
          Length = 1212

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 13   DLVFVDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVT 72
            D   VDA  +   A  I HSC+PNC  KV  V+G  +I IY  R I  GEE+T++Y    
Sbjct: 1134 DDYVVDATKRGGLARFINHSCDPNCYTKVITVEGQKKIVIYAKRRIYAGEELTYNYKFPL 1193

Query: 73   ESKEEHEASVCLCGSQICRGS 93
            E K+      C CGSQ CRGS
Sbjct: 1194 EEKK----IPCHCGSQRCRGS 1210



>Os02g0554000 Zinc finger, CW-type domain containing protein
          Length = 637

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 17  VDAMHKANYASRICHSCNPNCEAKVTAVDGHYQIGIYTVRPIAEGEEITFDYNSVTESKE 76
           +DA  K N    I HSC+PNC  +   V+G   IGI+ +R I +GEE+TFDYN V  S  
Sbjct: 260 IDACTKGNLGRFINHSCSPNCRTEKWMVNGEVCIGIFAMRNIKKGEELTFDYNYVRVSGA 319

Query: 77  EHEASVCLCGSQICRGSYLNFSGEGA 102
             +   C CG+  CRG Y+     GA
Sbjct: 320 APQK--CFCGTAKCRG-YIGGDISGA 342



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.137    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,742,588
Number of extensions: 751763
Number of successful extensions: 1754
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1753
Number of HSP's successfully gapped: 3
Length of query: 494
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 389
Effective length of database: 11,553,331
Effective search space: 4494245759
Effective search space used: 4494245759
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)