Os08g0169800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase/epoxide hydrolase family protein.
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Os08g0169800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase/epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.37 | 0.237 | 11 | -0.897 | 0.119 | -1.24 | 0.624 | -0.394 | -0.258 | 8.11 | 24.47 | 813 | -- | -- |
| 25.55 | 0.235 | 11 | -0.95 | 0.115 | -1.19 | 0.528 | -- | -0.268 | 8 | 24.5 | 839 | -- | -- |
| 26.31 | 0.239 | 11 | -0.905 | 0.117 | -1.23 | -- | -0.241 | -0.267 | 9.55 | 24.42 | 850 | -- | -- |
| 26.3 | 0.239 | 11 | -0.951 | 0.118 | -1.22 | -- | -- | -0.277 | 9.65 | 24.63 | 850 | -- | -- |
| 26.87 | 0.241 | 11 | -0.888 | -- | -1.26 | -- | -0.346 | -0.25 | -- | 23.89 | 1072 | -- | -- |
| 46.93 | 0.321 | 11 | -0.615 | 0.00339 | -- | 0.631 | -- | -0.0284 | 7.31 | -- | -- | -- | -- |
| 47.74 | 0.324 | 11 | -0.604 | 0.0658 | -- | -- | -- | -0.0311 | 1.82 | -- | -- | -- | -- |
| 26.98 | 0.242 | 11 | -0.95 | -- | -1.19 | -- | -- | -0.268 | -- | 24.35 | 995 | -- | -- |
| 46.98 | 0.319 | 11 | -- | 0.0788 | -0.793 | -- | -- | -0.0983 | 9.56 | 24.78 | 761 | -- | -- |
| 48.01 | 0.324 | 11 | -0.601 | -- | -- | -- | -- | -0.0296 | -- | -- | -- | -- | -- |
| 57.36 | 0.354 | 11 | -- | 0.0549 | -- | -- | -- | 0.0362 | 1.51 | -- | -- | -- | -- |
| 47.26 | 0.32 | 11 | -- | -- | -0.767 | -- | -- | -0.0895 | -- | 24.31 | 760 | -- | -- |
| 57.54 | 0.354 | 11 | -- | -- | -- | -- | -- | 0.0372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 2 | 25.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 4 | 25.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 11 | 25.59 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 16 | 25.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 18 | 25.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 21 | 25.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 29 | 25.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 31 | 25.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 40 | 25.84 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 47 | 25.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 101 | 26.29 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 106 | 26.31 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 369 | 27.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 404 | 27.53 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 414 | 27.57 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 463 | 27.73 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 476 | 27.76 | temperature | 25 | 1440 | < th | dose dependent | sin | 3 | NA |
| 533 | 27.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 556 | 28.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 8 |
| 604 | 28.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 609 | 28.15 | humidity | 50 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 652 | 28.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 685 | 28.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 708 | 28.30 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 739 | 28.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 777 | 28.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 787 | 28.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 852 | 28.44 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 868 | 28.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 914 | 28.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 987 | 28.59 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |